PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27928
Common NameKK1_029599
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 304aa    MW: 34811.2 Da    PI: 7.2523
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27928genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.21.8e-13124168347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ +  ++G+g+W+ I+r +  ++t+ q+ s+ qky
    C.cajan_27928 124 PWTEEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKY 168
                      8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512939.0522075IPR017884SANT domain
SMARTSM007175.7E-82173IPR001005SANT/Myb domain
SuperFamilySSF466893.95E-112377IPR009057Homeodomain-like
CDDcd001672.26E-62470No hitNo description
PROSITE profilePS5129420.215117173IPR017930Myb domain
SuperFamilySSF466894.16E-16119173IPR009057Homeodomain-like
TIGRFAMsTIGR015572.6E-17120172IPR006447Myb domain, plants
SMARTSM007175.6E-11121171IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.2E-11121167IPR009057Homeodomain-like
CDDcd001677.61E-9124168No hitNo description
PfamPF002495.8E-11124168IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
METLYSPCIM PNSNWFVQEG YSTEWTREDN KKFESALAIF DKDTPDRWFK VAAMIPGKTV  60
FDVIKQYREL EEDVSEIEAG RVPLPGYLAS SFTFELVDNH NYDGCRRRPA PVRGSDHERK  120
KGVPWTEEEH RRFLMGLLKY GKGDWRNISR NFVVTKTPTQ VASHAQKYYI RQKVSGGKDK  180
RRPSIHDITT VNLTETAESD KNKAQLFNVS PMIAPQQRLN SMSKVQLDWS SHYSDGSLMV  240
FNPNSDDDLF LSSSSDITSK TLKMQGQDLY DCALHEAYAK VKVPSFSMAP RDFNNEAVFG  300
IHAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A5e-162087673RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27928
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150361e-144AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020233753.10.0transcription factor DIVARICATA isoform X2
SwissprotQ8S9H77e-88DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A151S1M90.0A0A151S1M9_CAJCA; Myb-like protein J
STRINGXP_007141798.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF46634162
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.19e-92MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]