PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_27582

Common Name

KK1_028953

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Trihelix

Protein Properties

Length: 339aa MW: 39293.8 Da PI: 4.2976

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_27582	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.7	2e-15	119	204	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W ++e+l+L+e+ e+ +l+r++l+ W ev++k+ +e ++ers qC++ +++l++rykk+k++ + s ++++f++++ C.cajan_27582 119 EWNEHETLVLLEVWGEKFLQLGRNSLRLEEWNEVAEKVsEELKVERSVAQCRSVLDKLKRRYKKEKARVDEM-GLGSCKWAFFKKMD 204 5***********************************8889**********************9996.88889******8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.4E-18	118	205	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence Send to blast
MDDMEDDARY PPKSFSLIRQ NPSHRHKHPL RGGAASYHRP LPPRYEEPDD FDDGNEDPDD 60 FDDAEDDEEN GYDGAMEEND VAYPRIPKKR KVSVTGGGNS YEFAPRVKFS YGSGSGSEEW 120 NEHETLVLLE VWGEKFLQLG RNSLRLEEWN EVAEKVSEEL KVERSVAQCR SVLDKLKRRY 180 KKEKARVDEM GLGSCKWAFF KKMDMFMASS ARQEVYLNRS NGFDEMRDSP GESESDEDDD 240 DDCAADDHHA DEEDQTSFRA LADSIHKFGK IYEKIENSKR QQMMELEKMR LDFNRELELQ 300 KKQILERAQA EIAKIQEGDQ EVEEEEEDDT DTSAENLSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	178	DKLKRR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_27582

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020233256.1	0.0	trihelix transcription factor ASIL2
TrEMBL	A0A151S3A2	0.0	A0A151S3A2_CAJCA; Uncharacterized protein
STRING	GLYMA09G32130.2	1e-149	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2441	34	80

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	1e-74	Trihelix family protein