PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27256
Common NameKK1_027614
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 492aa    MW: 57226.7 Da    PI: 6.1321
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27256genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix93.22.7e-2931114186
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                    rW++qe+laL+++r++m+  +r+++lk+plWe+v++k++e g++rs+k+Ckek+en+ k++k++ke++++++  + +t+++fdql+
  C.cajan_27256  31 RWPRQETLALLKIRSDMDAVFRDSSLKGPLWEQVARKLAELGYHRSAKKCKEKFENVYKYHKRTKESRSGKH--EGKTYKFFDQLQ 114
                    8********************************************************************964..4557******98 PP
2trihelix105.15.2e-33300385187
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                    rW+k ev+aLi++r+++e +++++  k+plWe++s+ m++ g++rs+k+Ckekwen+nk++kk+ke++k+r  e+s+tcpyf++l+a
  C.cajan_27256 300 RWPKTEVHALIRLRTSLEPKYQENGPKAPLWEDISAGMSRLGYNRSAKRCKEKWENINKYFKKVKESNKQR-REDSKTCPYFHELDA 385
                    8*********************************************************************8.78999********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.0052890IPR001005SANT/Myb domain
PfamPF138372.6E-2030116No hitNo description
PROSITE profilePS500906.9573088IPR017877Myb-like domain
CDDcd122031.07E-223095No hitNo description
PROSITE profilePS500907.201293357IPR017877Myb-like domain
SMARTSM007170.093297359IPR001005SANT/Myb domain
CDDcd122031.10E-26299364No hitNo description
PfamPF138375.0E-23299386No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    Send to blast
MVDANSGEEK IKEGAGEEEG DKITNSCGGN RWPRQETLAL LKIRSDMDAV FRDSSLKGPL  60
WEQVARKLAE LGYHRSAKKC KEKFENVYKY HKRTKESRSG KHEGKTYKFF DQLQALENQF  120
PLSYPPKPLP TLATTTNTVA LLPPPTTRPI ATNPRNPPEP NNNENNNNNN IPFSLPNMNN  180
LFSTTSTSSS TASDEDLEEK YRKKRKWKDY FRRLTRQVLV KQEEMQKRFL EAIDKREREH  240
VAQQEAWRIQ EMARINREHE LLVQERSTAA AKNAAVIAFL QQLSAPQPQT QVMISLSSSR  300
WPKTEVHALI RLRTSLEPKY QENGPKAPLW EDISAGMSRL GYNRSAKRCK EKWENINKYF  360
KKVKESNKQR REDSKTCPYF HELDALYREK SKTQNPFGAS FHNMKAHEMM EPLMVQPEQQ  420
WRPPSEYEQG AAKESNEGQY ERRDREEEDE EEEEQEELED DNEEGDLESV EDEGDSRYEI  480
ATNKLSSVDT VE
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds specific DNA sequence. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27256
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020232124.10.0trihelix transcription factor GT-2
SwissprotQ391171e-135TGT2_ARATH; Trihelix transcription factor GT-2
TrEMBLA0A151S7140.0A0A151S714_CAJCA; Uncharacterized protein
STRINGGLYMA16G28240.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37334181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.22e-81Trihelix family protein