PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_26986
Common NameKK1_028357
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 451aa    MW: 49603.9 Da    PI: 7.6329
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_26986genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.54.9e-32192249260
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                    dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk  ers+ d++++ei+Y+g+H+h+k
  C.cajan_26986 192 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 249
                    8****************************************.***************85 PP
2WRKY57.13.5e-18365394130
                    ---SS-EEEEEEE--TT-SS-EEEEEE-ST CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa 30 
                    ldDgy+WrKYGqK+v+g+++prsYY+Ct +
  C.cajan_26986 365 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNS 394
                    59**************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.617186250IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.1E-27187250IPR003657WRKY domain
SuperFamilySSF1182904.84E-25189250IPR003657WRKY domain
SMARTSM007744.1E-34191249IPR003657WRKY domain
PfamPF031061.2E-24192248IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.1E-20350394IPR003657WRKY domain
SuperFamilySSF1182903.66E-15357394IPR003657WRKY domain
PROSITE profilePS5081120.908360395IPR003657WRKY domain
SMARTSM007742.9E-11365411IPR003657WRKY domain
PfamPF031066.3E-13366394IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MSPAKLPISR SPCVTIPPGL SPTSFLESPV LLSNMKVEPS PTTGSLSMLH QTAHGSVTSA  60
ASATFPVTTA CFNSNTVDDR KPSFFEFKPH SRSNMVPADS DNHASEKSTQ IDGQGKTQAF  120
DSSPFVKNEI ADPSNELSLS SPVQMVSSGA GARVEGDLDE LNPRSNIATG LQASQVDNRG  180
SGLSAAADRV SDDGYNWRKY GQKHVKGSEF PRSYYKCTHP NCEVKKLFER SHDGQITEII  240
YKGTHDHPKP QPNRRYSSGT MMSMQEERSE KALTGRDDKG SNICGQMSHP ADPDSTPELS  300
PVATNDGDLE GTGFLSNRNT DEVDDDDPFS KRRKMDLGNA DITPVVKPIR EPRVVVQTLS  360
EVDILDDGYR WRKYGQKVVR GNPNPRSYYK CTNSGETHIL KPAWRIHHCA WRACLNGVSD  420
GHASGAKNYA RRDTQQQPSN FRKSHQNLHT N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-17192395877Probable WRKY transcription factor 4
2lex_A4e-17192395877Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_26986
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM5203900.0KM520390.1 Macrotyloma uniflorum WRKY mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020232745.10.0probable WRKY transcription factor 20
SwissprotQ93WV01e-136WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A151S5250.0A0A151S525_CAJCA; Putative WRKY transcription factor 20
STRINGGLYMA18G09040.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39463463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.21e-138WRKY family protein