PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_26807
Common NameKK1_027996
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HD-ZIP
Protein Properties Length: 796aa    MW: 89765.5 Da    PI: 6.4262
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_26807genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.59.8e-181972356
                   --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
       Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    R++++++ + +Lee F+++ +p++++r++++++lgL+ +qVk+WFqN++++ k
  C.cajan_26807 19 YRHRHNPDKIARLEEIFNECAHPDESRRRQISEELGLDAKQVKFWFQNKKTQLK 72
                   6999**********************************************9887 PP
2START137.81.2e-433365572206
                    HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
          START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv............dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                    +a+ a++el+k+ + +ep+W++s   ++g+  lq ++ +k+            +++e +++ +vv m  ++lve +l++  +W   ++    ka+t
  C.cajan_26807 336 IANNAMEELMKLLSMNEPFWFRSL--HDGKFILQHESYQKTfpwsdclragphSRIESSKDLRVVSMSGTQLVEMFLNSD-KWVDLFPtivkKAQT 428
                    7899********************..666666666666666666666*********************************.88888888888**** PP

                    EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
          START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                    ++v +sg      galqlm+ae+  ls+lvp R+f+f+Ry++q +ag+wvi dvS+ds ++++   sv  a +lpSg+li+++ +g ++v wvehv
  C.cajan_26807 429 IQVFESGllgnrnGALQLMNAEMHILSHLVPtREFLFLRYCKQIEAGVWVIGDVSLDSSKYKT---SVSQAWRLPSGCLIQEMTQGLCRVSWVEHV 521
                    *************************************************************98...6999999*********************** PP

                    E--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
          START 171 dlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                    ++++++  h++++ ++++  a ga +wv+tl+r ce+
  C.cajan_26807 522 NVDDNIQtHEIFKDIIHNN-AYGAERWVSTLERMCER 557
                    ******99*********97.579************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.1E-141074IPR009057Homeodomain-like
PROSITE profilePS5007114.221474IPR001356Homeobox domain
SMARTSM003897.6E-131678IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.608.8E-151880IPR009057Homeodomain-like
PfamPF000463.3E-151972IPR001356Homeobox domain
CDDcd000861.05E-132072No hitNo description
PROSITE patternPS0002704972IPR017970Homeobox, conserved site
PROSITE profilePS5084837.762326560IPR002913START domain
SuperFamilySSF559617.69E-24329558No hitNo description
CDDcd088759.22E-90331556No hitNo description
Gene3DG3DSA:3.30.530.206.5E-5334525IPR023393START-like domain
SMARTSM002343.2E-30335557IPR002913START domain
PfamPF018525.1E-36336557IPR002913START domain
SuperFamilySSF559612.2E-6580733No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 796 aa     Download sequence    Send to blast
MRPSTSSGST LGQQCVNNYR HRHNPDKIAR LEEIFNECAH PDESRRRQIS EELGLDAKQV  60
KFWFQNKKTQ LKTLNERLDN HVLRLDNARL QSENHRMSET LKNLLCVPCG GQVMGVEERE  120
LSLQILRAQN FLLNTEASKL SYLIDSLMML LPPFPSSHDT SQGSLQNQMP GIPVQNQFIP  180
SQDHHIHAQN QLVPPHDHHI HACASHQYTP VVTTPAIDQN IPAHHPDIHH LTSSSDYNIP  240
GLSTTLAQNI PTLISTCKQN NNIPVVEQEI QEPNHGIINI LSLTLDQDMP PLGRDIPAIN  300
QYNMPHLDLD AIVEIRNNDM LMRQSTNTED ALMLQIANNA MEELMKLLSM NEPFWFRSLH  360
DGKFILQHES YQKTFPWSDC LRAGPHSRIE SSKDLRVVSM SGTQLVEMFL NSDKWVDLFP  420
TIVKKAQTIQ VFESGLLGNR NGALQLMNAE MHILSHLVPT REFLFLRYCK QIEAGVWVIG  480
DVSLDSSKYK TSVSQAWRLP SGCLIQEMTQ GLCRVSWVEH VNVDDNIQTH EIFKDIIHNN  540
AYGAERWVST LERMCERFAC ASVETIPSYE AGGVIRSLEG RKSIIKLAHR MVKTFCGNLD  600
MQGDTNFPHL TKMNDDGIRL SVHVNNTKPN APKGMILGAA TTFRLPFSPQ NVFDYLIDNK  660
ERPKWDVLCC GNEGCEIQRI STGINPGNYI SIMQSFIPRE NNIMILQESY VDALGSMLVY  720
APFDTEIMNG QSNVPEGQDG QIDKSAGSLV TLMFQLLASS PSKLGMVDIE FVGVVKTLVT  780
STVEKIKVAL NCTNLK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_26807
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2358832e-55AC235883.2 Glycine max clone GM_WBc0013D02, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020232433.10.0homeobox-leucine zipper protein ROC7
TrEMBLA0A151S6960.0A0A151S696_CAJCA; Homeobox-leucine zipper protein HDG12
STRINGXP_007143783.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1737556
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17920.11e-117homeodomain GLABROUS 12