PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_26519
Common NameKK1_028878
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 342aa    MW: 39335.4 Da    PI: 11.3307
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_26519genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.92.1e-07846947
                     HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     d l++ + ++ G+g+W  I+r+  k++t  q+ s+ qky
    C.cajan_26519  8 DRLFLLGLEKCGKGDWQNISRYYVKTKTSAQVASHAQKY 46
                     5789999*******************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015577.6E-10849IPR006447Myb domain, plants
SuperFamilySSF466896.22E-9851IPR009057Homeodomain-like
CDDcd001675.02E-5847No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MTFGCVCDRL FLLGLEKCGK GDWQNISRYY VKTKTSAQVA SHAQKYFLRH NGSSKEKKRK  60
SIHDITLQNK RPVSHHHVHQ NVPSPKITIP QQSHPMNRSV PSTNLAMPQL HNVHHLVPHH  120
NINSQQQNRV PTPNLTIQRS PNMHHSVPHH IDQQRWAPST NLAVQQLHDV HHLVPHHNNQ  180
QNRVPSPNLT IQRSPNMHHS VPHHIGQQRW VPSTNLAVQQ LNDVHHLVPH HNNQQSRVPS  240
PNLTIQQSPN MHHSVPQHIG QKSWAPSTNF AMQQIHNVHH SLPHQIYHQN RTPTNLAMQQ  300
PHRMHLTQEM IHMNPPVVNM PHQMGGFNNG FPPNNVSSYG RI
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_26519
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028238564.18e-66putative mediator of RNA polymerase II transcription subunit 12
TrEMBLA0A151S3R80.0A0A151S3R8_CAJCA; Myb-like protein J
STRINGGLYMA07G08081.12e-64(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3088622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.13e-21MYB family protein