PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_25149
Common NameKK1_025571
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 367aa    MW: 40619.2 Da    PI: 6.1802
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_25149genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.17.7e-33187244259
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                    +Dgy+WrKYGqK+ k+s +prsYYrCt+++C vkk+vers+edp+vv +tYeg+H+h+
  C.cajan_25149 187 EDGYRWRKYGQKDLKNSAHPRSYYRCTFPNCGVKKRVERSTEDPSVVMTTYEGTHTHP 244
                    8********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-33171245IPR003657WRKY domain
SuperFamilySSF1182907.72E-29178244IPR003657WRKY domain
PROSITE profilePS5081128.024181246IPR003657WRKY domain
SMARTSM007741.3E-39186245IPR003657WRKY domain
PfamPF031061.5E-26187244IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MDEKGEKEEN SKPSSTTENF VAFSDEISNM SFPFSPAFSS IFDMMSPLPP SLCDDPEFSD  60
FGGFMDMLSL PDYTWHQNIV TTSAPPPPEI TQPLQSLPSP NAPNSFEVVN TSLSPNSLPI  120
LSPPNEVTDK ATENKNETKD ETMNSDKGGE NNDQDKIKNQ LKPKKRNQKK KESRVAFMTR  180
SEVDHLEDGY RWRKYGQKDL KNSAHPRSYY RCTFPNCGVK KRVERSTEDP SVVMTTYEGT  240
HTHPSTVPLP PKVGLVQKAS GSGGPSGVAS ANYALRQQHS QRQQELEQQA LAAAALYNST  300
STSPLNVVNA SSCINFGNMN ISSITGFLNN QENRQAFVPS RVVNPPPHAL LRDNGGLLQD  360
IIMPYRS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-241792431074Probable WRKY transcription factor 4
2lex_A4e-241792431074Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_25149
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020230271.10.0probable WRKY transcription factor 48
TrEMBLA0A151SCW30.0A0A151SCW3_CAJCA; Putative WRKY transcription factor 23
STRINGGLYMA07G36640.21e-88(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF100234114
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.13e-36WRKY DNA-binding protein 71