PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_25091 | ||||||||
Common Name | KK1_025513 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | WRKY | ||||||||
Protein Properties | Length: 289aa MW: 31698.8 Da PI: 10.6965 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.9 | 7.4e-32 | 209 | 267 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+++dp+++++tYeg+H+h+ C.cajan_25091 209 ADEYSWRKYGQKPIKGSPYPRGYYKCSSVrGCPARKHVERAQDDPNMLIVTYEGDHRHP 267 69*************************988****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 2.6E-16 | 167 | 206 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 1.0E-33 | 196 | 269 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 31.858 | 203 | 269 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.05E-27 | 206 | 269 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.2E-38 | 208 | 268 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.7E-27 | 210 | 267 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence Send to blast |
MEENIPIQEA ASAGLKSMEH LIRLLSSSAS SSSSSSSSSS SSHHHRLNLN HLDCTQITDF 60 TVSKFKQVIN LLNRTGHARF RRAPSQPQPQ TLTLHFANPN SSTQPSTSKT KEASTFSISP 120 PMSMSMSMSM STTTSSFISS ITADGSVSDG KIGPFLPPKP PLSSSHRKRC HDATLSSSAN 180 CHCSKRRKSR VKRMIRVPAI SSKMADIPAD EYSWRKYGQK PIKGSPYPRG YYKCSSVRGC 240 PARKHVERAQ DDPNMLIVTY EGDHRHPQPR LRQTTGPSAA VASPEIGKF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 1e-22 | 196 | 269 | 2 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 166 | 187 | RKRCHDATLSSSANCHCSKRRK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Regulates rhizobacterium B.cereus AR156-induced systemic resistance (ISR) to P.syringae pv. tomato DC3000, probably by activating the jasmonic acid (JA)- signaling pathway (PubMed:26433201). {ECO:0000250, ECO:0000269|PubMed:26433201}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_25091 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Strongly during leaf senescence (PubMed:11722756). Repressed by rhizobacterium B.cereus AR156 in leaves, and to a lower extent, by P.fluorescens WCS417r (PubMed:26433201). {ECO:0000269|PubMed:11722756, ECO:0000269|PubMed:26433201}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020230188.1 | 0.0 | WRKY transcription factor WRKY51 | ||||
Swissprot | Q9SV15 | 2e-85 | WRK11_ARATH; Probable WRKY transcription factor 11 | ||||
TrEMBL | A0A151SCS6 | 0.0 | A0A151SCS6_CAJCA; Putative WRKY transcription factor 11 | ||||
STRING | GLYMA17G06450.1 | 1e-134 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1314 | 34 | 98 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 2e-76 | WRKY DNA-binding protein 11 |