PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_24678
Common NameKK1_025041
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 453aa    MW: 49875.3 Da    PI: 6.9844
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_24678genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.80.000453503821855
                    HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +++  L++++ +      +K + a++L +A+ YIk Lq
  C.cajan_24678 350 DKITALQQIVSPF-----GKTDTASVLFEAIGYIKFLQ 382
                    7888889998887.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.864332381IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-9347397IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.2E-8347389IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.21E-4350386No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MTEESAGNTV ATSITPLNWW YLQANSLSSW NETNNTWNNQ PNPNSSSSCE EDISVSTSFT  60
NASNHSSLTV ESSRRLIEPP APSSNELMGE HHASDNQLWS HVLSGVGSNG ELHNSQEIGE  120
NFLDALSSKS MTSTMCQPVC DYLKKLDTSW DYSGSTSLNS FEKHLNGFSE AMIENNERLT  180
KLSNLVSTWS IAPPDPEVSS HFDPQTNNMS LRSAGFGRPL NANGYQNGFN NLSAGDSCKL  240
YQGLPNLSSC TRNFSDVISF DSRLGRPVIG IHSQKPSMKY LNNVSESKKQ GLQAPSPIRT  300
NINGKGEGTT REVKKKRSEE SSDAMLKKPK QDASTASSSK VQAPKVKLGD KITALQQIVS  360
PFGKTDTASV LFEAIGYIKF LQEQVQLLSN PYLKANSHKD PWGSLDRKDK EETKVDLRSR  420
GLCLVPTSCT PLVYRESSGP DYWTPAYRGC LYR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_24678
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0926770.0BT092677.1 Soybean clone JCVI-FLGm-11D9 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229748.10.0transcription factor bHLH111 isoform X1
TrEMBLA0A151SDZ40.0A0A151SDZ4_CAJCA; Transcription factor bHLH111 family
STRINGGLYMA10G35040.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101162629
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.19e-66bHLH family protein