PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_24231
Common NameKK1_024906
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 611aa    MW: 68917.3 Da    PI: 6.1379
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_24231genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.68e-10549602346
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.......TTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg.......kgRtlkqcksrwqk 46 
                      +WT+eE+el+ ++vk++G +    W++I +          k+Rt  ++k++w +
    C.cajan_24231 549 PWTAEEEELIREGVKKFGLNdpkKWNKILAFGScvfemtgKRRTSQDLKDKWKN 602
                      8****************************9888999999*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579031.02E-10261317IPR011011Zinc finger, FYVE/PHD-type
Gene3DG3DSA:3.30.40.101.6E-10263318IPR013083Zinc finger, RING/FYVE/PHD-type
PROSITE profilePS500168.769267316IPR019787Zinc finger, PHD-finger
SMARTSM002494.4E-6269314IPR001965Zinc finger, PHD-type
PROSITE patternPS013590270313IPR019786Zinc finger, PHD-type, conserved site
PROSITE profilePS5129410.028542608IPR017930Myb domain
SuperFamilySSF466894.95E-11544605IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.9E-12544609IPR009057Homeodomain-like
SMARTSM007172.4E-8546606IPR001005SANT/Myb domain
CDDcd116601.35E-14548605No hitNo description
PfamPF139211.4E-7550606No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 611 aa     Download sequence    Send to blast
MDGDDDPSAL AWLWVVEALS ACKKISPPTL QRMINSGPVK DEKLSETTRE LVALRCLEEV  60
SACVVDTDAS STVDSRVGFD FSRGCEDVLQ ETLGELIPLS KLKMAGAELL KWDVQPFVKH  120
KRADTFKCHL EQLRESILEG THPHTDYMKE RSGLFPQNGN RIQHKISGTK PWSKQETDLQ  180
LEDPNGSLRQ SASVKAPDHT ENSCGVEISG AIVYQDIRPL NLSQKPVASD KTKVDMVNEC  240
GAELSSDGDG YHNEKNYFEA RTESNEQNLC MKCNEGGQLL ACKKTTCPLM VHKNCLGASA  300
QLDAKGNFFC PFCAYSQAIS EYLEAKKNAS FAREELAIFI SKGIQNQAAE LVYDFQRQEH  360
CFSRKSSKCE HSHVKDNEND QLTGYEGNRE DQDGGHPNEA NNLQFEKCHQ QAPIPCIHSS  420
CREKENVNNG YDKVLREEEI GEMPNAKSLT GGRVEETEVS TDHVDRHVGD KFTCEKTNIA  480
PVNKSNAGEV PQEMIKQHNI DGTIEPVRAH DTGKEEISEH ECETHSIPRY TMRFREHVTQ  540
CQFRRRKIPW TAEEEELIRE GVKKFGLNDP KKWNKILAFG SCVFEMTGKR RTSQDLKDKW  600
KNMCKAHSKS K
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_24231
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229516.10.0uncharacterized protein LOC109810464
TrEMBLA0A151SET00.0A0A151SET0_CAJCA; Uncharacterized protein
STRINGGLYMA04G00630.21e-178(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38722224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.12e-07MYB_related family protein