PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_22429
Common NameKK1_023090
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 589aa    MW: 65242 Da    PI: 4.4565
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_22429genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.67.2e-5151312128
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     pGfrFhPtdeelvv+yLk+k++g+  +  ++i+ vd+yk+ePwdLp  +k+k+++ ewyfFs  d+ky +g+r+nrat++gyWk+tgkd++v + 
  C.cajan_22429   5 GPGFRFHPTDEELVVFYLKRKITGNLSRY-DHIAVVDVYKLEPWDLPsmSKLKTKDLEWYFFSILDRKYGNGSRTNRATEKGYWKTTGKDRAVNQ- 98 
                    59***********************9888.89***************5337777888************************************99. PP

            NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    ++++vg+kktLv++ grap+g++t+Wvmhey+l
  C.cajan_22429  99 GDRTVGMKKTLVYHIGRAPHGRRTNWVMHEYKL 131
                    999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-593154IPR003441NAC domain
PROSITE profilePS5100556.0384154IPR003441NAC domain
PfamPF023658.0E-276131IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009644Biological Processresponse to high light intensity
GO:0009962Biological Processregulation of flavonoid biosynthetic process
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 589 aa     Download sequence    Send to blast
MARLGPGFRF HPTDEELVVF YLKRKITGNL SRYDHIAVVD VYKLEPWDLP SMSKLKTKDL  60
EWYFFSILDR KYGNGSRTNR ATEKGYWKTT GKDRAVNQGD RTVGMKKTLV YHIGRAPHGR  120
RTNWVMHEYK LLEEELARAG TVQDMFVLCR IFEKSGAGPK NGAKYGAPLD EKEWDEEVEE  180
EKKVVPLQSA ENVAENVVPV APLPVADDGV FDAGAYVETD DLDRNSNAVH VVLYVIVFGN  240
RYFLKLELDF SDIIGTVTFP SWNYHYGECS TQAEHSQVST KDQEPLASTF GISVPENGQP  300
LDMTEQHVVV TDSVKDEHSG EPSNFENLLN FNDPGNDMDL DLLYMDAMEK LPLLDEGSFL  360
ETNDLAVVNE GDPIKDDPSG DAMLDEYLAL PDDDICKYIS FDSQISESEN SIPNQGPLFT  420
QQNVEGENTD NDVVSKLYSE AKTSNEASSV QNKQEKLVPG STNSFVEQAY GWLANIPAAP  480
AHALEFPAKE IALGLHPAAQ SSSPAHITTG MISITNVTFR GNAMDWTMGK NGGFNTVVST  540
GFSQPDVDSG LVSSKTAFVL SHGWIFLTGF SVLILSLSCK IGSIMYTGK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A8e-47416017171NO APICAL MERISTEM PROTEIN
1ut4_B8e-47416017171NO APICAL MERISTEM PROTEIN
1ut7_A8e-47416017171NO APICAL MERISTEM PROTEIN
1ut7_B8e-47416017171NO APICAL MERISTEM PROTEIN
3swm_A7e-47416020174NAC domain-containing protein 19
3swm_B7e-47416020174NAC domain-containing protein 19
3swm_C7e-47416020174NAC domain-containing protein 19
3swm_D7e-47416020174NAC domain-containing protein 19
3swp_A7e-47416020174NAC domain-containing protein 19
3swp_B7e-47416020174NAC domain-containing protein 19
3swp_C7e-47416020174NAC domain-containing protein 19
3swp_D7e-47416020174NAC domain-containing protein 19
4dul_A8e-47416017171NAC domain-containing protein 19
4dul_B8e-47416017171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00059PBMTransfer from AT5G04410Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_22429
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2353361e-118AC235336.1 Glycine max strain Williams 82 clone GM_WBb0084A23, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020222542.10.0NAC domain-containing protein 78
TrEMBLA0A151T0W60.0A0A151T0W6_CAJCA; NAC domain-containing protein 78
STRINGXP_007144249.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53473247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-102NAC domain containing protein 53