PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_22153
Common NameKK1_022809
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 328aa    MW: 36954.3 Da    PI: 5.318
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_22153genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.1e-194594255
            AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  C.cajan_22153 45 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 94
                   789******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.47E-3244101No hitNo description
PROSITE profilePS5103219.55945102IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-2745101IPR001471AP2/ERF domain
SMARTSM003802.0E-3545108IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-1945102IPR016177DNA-binding domain
PfamPF008477.3E-144594IPR001471AP2/ERF domain
PRINTSPR003674.1E-84657IPR001471AP2/ERF domain
PRINTSPR003674.1E-86884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MARKRKATTS GEVVEERNLG EGTMAWDDMM KQAAALGGVQ RARKRFVGVR QRPSGRWVAE  60
IKDTIQKIRV WLGTFDTAEE AARAYDEAAC LLRGANTRTN FWPCSQSSSS PALSSKITNL  120
LLQRLKERNN NNNNTCFSSS LVNHPQMQQQ VDYSYAYEAG STQFSIDQFT DFLNDPEDYS  180
TSNNDYINNS AQIDYITSSF ESCLTEKDVE TEMDVQYKSI DVTTPQTSSN DSNSAVMKRM  240
TYERKFSASL YAFNGIPECL KLKLESGNMK KGRGLADQLT NLKMACSKNK VEKNNKEEKD  300
VDGELLLWNS LDLPPICFVN LLENGSFN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1438101771Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_22153
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150441e-141AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014495794.11e-175dehydration-responsive element-binding protein 2F-like
TrEMBLA0A151T0160.0A0A151T016_CAJCA; Ethylene-responsive transcription factor RAP2-11
STRINGXP_007151265.11e-167(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-22related to AP2 11