PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_21169
Common NameKK1_021798
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 723aa    MW: 80866.2 Da    PI: 8.085
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_21169genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.38.1e-09604653147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                      r +++ eE e lv+av++lG+g+W+ +  +     k+Rt  ++k++w ++
    C.cajan_21169 604 RRPFSVEEVEALVQAVEKLGTGRWRDVKICAFdnaKHRTYVDLKDKWKTL 653
                      679*************************99999**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF542365.82E-6409491IPR029071Ubiquitin-related domain
PROSITE profilePS5129414.4599658IPR017930Myb domain
SMARTSM007172.2E-8603656IPR001005SANT/Myb domain
PfamPF002491.1E-5604653IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-10604654IPR009057Homeodomain-like
CDDcd116603.79E-17605655No hitNo description
SuperFamilySSF466892.73E-16605686IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 723 aa     Download sequence    Send to blast
MRMLETLRME TFTSSNDYTT VQIDTVIFKT VENLNPQIPS LPSIAKRLEY GFNGYQAPAM  60
PRASRSTRRR AKFQRAEDNQ KCAFDLLATV AGKLLQERED PTMSSNASSE KDRCGFVKDC  120
QDANKPTKSE LSDEGSCHEK SFSCPSQTND KNCCLKEFPI LAIDGHAGIA SIVTSSSSVE  180
RFIAEKLVDG NRHFKMENVT GEVKLDSPDC SKDSHFQLDV DTSKGKDELH KFENVPNGSG  240
IDMCSFEKPL DENPPALISI GGNAKLSGYN DRTPLSKGCD DVPVVSRDDD ENSSGCIHPI  300
NTKPKSFRPK NCIGDNRISK RLASNFRKVA EKPKDGTRFN SDGDWKRTYY SKRNCNKRQS  360
SQMNIPFKKR KLYYSSVSNT NAFIRSGGIY YSPENCMNKD ACDSPPGMHK VKLRIKSFRV  420
PELFIEVPET ATIGSLKRTV MDAVTAVLGG ELHVGVFLQG KKVRDDSKTL LQTGISHDNQ  480
MDALGFTLES NSSHSLPIVC AAHSPRPSAD ITQPVIRYPS SPAVIDQKIQ GNSDMSPEHQ  540
VTSLASHFES DYDSAPSPIN MSVDNGMKDS KELVTVLEMD KEELAMVPVL QKPKRSEVVQ  600
RRIRRPFSVE EVEALVQAVE KLGTGRWRDV KICAFDNAKH RTYVDLKDKW KTLVHTARIS  660
PQQRRGEPVP QELLDRVLVA HSYWSQQQTK QQHKQHPETE TVFSFNNGQG HVDGGVMVSD  720
FCY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2juh_A3e-535886921105Telomere binding protein TBP1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_21169
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020214264.10.0telomere repeat-binding protein 5 isoform X1
RefseqXP_020214265.10.0telomere repeat-binding protein 5 isoform X1
RefseqXP_020214266.10.0telomere repeat-binding protein 5 isoform X1
TrEMBLA0A151TMC00.0A0A151TMC0_CAJCA; Telomere-binding protein 1
STRINGGLYMA11G14760.60.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13562844
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07540.11e-122TRF-like 2