PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_21061 | ||||||||
Common Name | KK1_021690 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | NAC | ||||||||
Protein Properties | Length: 299aa MW: 34359.5 Da PI: 8.2963 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 152.9 | 1.5e-47 | 15 | 142 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+++yLk+ v gkkl+ +vi ++iy+++PwdLp +k +e+ewyfF++rdkk+ +g r+nr+t++g+Wkatg+d+++++ C.cajan_21061 15 LPGFRFHPTEEELLDFYLKNMVVGKKLRY-DVIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLsd 109 69**************************9.99***************8888899*************************************98766 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +gl+ktLvfy+grapkg ktdWvm+eyrl C.cajan_21061 110 PKRIIGLRKTLVFYEGRAPKGCKTDWVMNEYRL 142 6778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.8E-57 | 5 | 160 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.219 | 14 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.7E-25 | 16 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence Send to blast |
MASMEDMNMS GEVTLPGFRF HPTEEELLDF YLKNMVVGKK LRYDVIGFLN IYHHDPWDLP 60 GLAKVGEREW YFFVPRDKKH GSGGRPNRTT EKGFWKATGS DRKIVTLSDP KRIIGLRKTL 120 VFYEGRAPKG CKTDWVMNEY RLPDNCKLPK EIVLCKIYRK ATSLKVLEQR AALEEEREMK 180 QMVGSPASPP SSTDTMSFSS PQEEQNVPLI PLLQHVLKKE SEIEEMVSLP KQEKTTTNQL 240 GLKDNKGPCG TSVQLPFGKD KLPDLQLPML TDWTQDTFWA QLNSPWLQNF TPTNILNFY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-44 | 1 | 160 | 1 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_21061 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | DQ028774 | 0.0 | DQ028774.1 Glycine max NAC domain protein NAC6 (NAC6) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020214708.1 | 0.0 | NAC domain-containing protein 22 | ||||
Swissprot | Q10S65 | 7e-96 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A151TM02 | 0.0 | A0A151TM02_CAJCA; Putative NAC domain-containing protein 94 | ||||
STRING | GLYMA12G02540.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6214 | 32 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-110 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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