PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_20225
Common NameKK1_020826
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 278aa    MW: 31918.5 Da    PI: 8.6644
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_20225genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM178.81.4e-5591341128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                    lppGfrFhPtdeel+v+yL++++++k++++ ++i+evdiyk++Pw+Lp k++ +e+ewyfFs+rd+ky++g r+nrat sgyWkatg+dk+++s +
  C.cajan_20225   9 LPPGFRFHPTDEELIVYYLCNQATSKPCPA-SIIPEVDIYKFDPWQLPDKTEFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIYS-G 102
                    79****************************.89***************99999*****************************************.9 PP

            NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                    ++ vg+kk+Lvfykgr pkg+ktdW+mheyrl
  C.cajan_20225 103 SKSVGVKKSLVFYKGRPPKGTKTDWIMHEYRL 134
                    9*****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.06E-656161IPR003441NAC domain
PROSITE profilePS5100561.2959161IPR003441NAC domain
PfamPF023653.7E-2710134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MEASTCSELP PGFRFHPTDE ELIVYYLCNQ ATSKPCPASI IPEVDIYKFD PWQLPDKTEF  60
GENEWYFFSP RDRKYPNGVR PNRATVSGYW KATGTDKAIY SGSKSVGVKK SLVFYKGRPP  120
KGTKTDWIMH EYRLAESKKP VCRKIGSMRL DDWVLCRIYK KKHMGKTLEH KEVHPTVQIT  180
NLTAANSDEQ KMMMNLPRTW SLTYLLDMNY LGPILSDGSY CSTFDFQINN ANFGIDPSVK  240
SQPVEMTNNY VADSGKYQVM KQSSTIDQPI CVKQMYNC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-72516213166NO APICAL MERISTEM PROTEIN
1ut4_B2e-72516213166NO APICAL MERISTEM PROTEIN
1ut7_A2e-72516213166NO APICAL MERISTEM PROTEIN
1ut7_B2e-72516213166NO APICAL MERISTEM PROTEIN
3swm_A2e-72516216169NAC domain-containing protein 19
3swm_B2e-72516216169NAC domain-containing protein 19
3swm_C2e-72516216169NAC domain-containing protein 19
3swm_D2e-72516216169NAC domain-containing protein 19
3swp_A2e-72516216169NAC domain-containing protein 19
3swp_B2e-72516216169NAC domain-containing protein 19
3swp_C2e-72516216169NAC domain-containing protein 19
3swp_D2e-72516216169NAC domain-containing protein 19
4dul_A2e-72516213166NAC domain-containing protein 19
4dul_B2e-72516213166NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to, and transactivates the promoter of the abscisic aldehyde oxidase AAO3. Promotes chlorophyll degradation in leaves by enhancing transcription of AAO3, which leads to increased levels of the senescence-inducing hormone abscisic acid (ABA) (PubMed:25516602). Involved in the control of dehydration in senescing leaves. Binds to the DNA sequence 5'-CACGTAAGT-3' of SAG113 promoter. SAG113 acts as negative regulator of ABA signaling for stomatal closure in leaves, and controls water loss during leaf senescence (PubMed:22184656). Transcription factor of the NAC family involved in senescence. May function in the transition between active cell division and cell expansion (PubMed:16640597). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:16640597, ECO:0000269|PubMed:18849494, ECO:0000269|PubMed:22184656, ECO:0000269|PubMed:25516602}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_20225
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by the heterodimer APETALA3 (AP3)/PISTILLATA (PI) (PubMed:9489703). Induced by senescence (PubMed:22184656, PubMed:24659488, PubMed:25516602). Induced by abscisic acid (ABA) (PubMed:22184656, PubMed:25516602). Induced by ethylene (PubMed:25516602). {ECO:0000269|PubMed:22184656, ECO:0000269|PubMed:24659488, ECO:0000269|PubMed:25516602, ECO:0000269|PubMed:9489703}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF4026030.0AF402603.1 Phaseolus vulgaris NAC domain protein NAC2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020223456.10.0NAC transcription factor 29
SwissprotO492551e-111NAC29_ARATH; NAC transcription factor 29
TrEMBLA0A151UBF10.0A0A151UBF1_CAJCA; NAC domain-containing protein 29
STRINGGLYMA20G04400.21e-177(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41033262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-106NAC-like, activated by AP3/PI
Publications ? help Back to Top
  1. Zhang K,Gan SS
    An abscisic acid-AtNAP transcription factor-SAG113 protein phosphatase 2C regulatory chain for controlling dehydration in senescing Arabidopsis leaves.
    Plant Physiol., 2012. 158(2): p. 961-9
    [PMID:22184656]
  2. Zhang K,Halitschke R,Yin C,Liu CJ,Gan SS
    Salicylic acid 3-hydroxylase regulates Arabidopsis leaf longevity by mediating salicylic acid catabolism.
    Proc. Natl. Acad. Sci. U.S.A., 2013. 110(36): p. 14807-12
    [PMID:23959884]
  3. Shinozaki Y, et al.
    Expression of an AtNAP gene homolog in senescing morning glory (Ipomoea nil) petals of two cultivars with a different flower life span.
    J. Plant Physiol., 2014. 171(8): p. 633-8
    [PMID:24709156]
  4. Xiao D, et al.
    SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1275-91
    [PMID:26304848]
  5. Sakuraba Y,Han SH,Lee SH,Hörtensteiner S,Paek NC
    Arabidopsis NAC016 promotes chlorophyll breakdown by directly upregulating STAYGREEN1 transcription.
    Plant Cell Rep., 2016. 35(1): p. 155-66
    [PMID:26441053]
  6. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]