PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_18758
Common NameKK1_019305
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 436aa    MW: 48066.5 Da    PI: 7.4973
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_18758genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1061.9e-33183240260
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                    dDgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkver+  d++++ei+Y+g+Hnhek
  C.cajan_18758 183 DDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAP-DGHITEIIYKGQHNHEK 240
                    8****************************************.***************85 PP
2WRKY107.66.2e-34322380159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                    ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++dpk+v++tYeg+Hnh+
  C.cajan_18758 322 LDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHD 380
                    59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.2E-30178242IPR003657WRKY domain
SuperFamilySSF1182903.14E-26181241IPR003657WRKY domain
SMARTSM007745.8E-37182240IPR003657WRKY domain
PROSITE profilePS5081123.801183241IPR003657WRKY domain
PfamPF031061.1E-25183239IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.9E-37307382IPR003657WRKY domain
SuperFamilySSF1182909.94E-30314382IPR003657WRKY domain
PROSITE profilePS5081139.192317382IPR003657WRKY domain
SMARTSM007749.6E-40322381IPR003657WRKY domain
PfamPF031061.4E-26323380IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MTLVSSFFGS DAGDCRSFSQ LLAGAMASPM AFSAAADNSA KDDDGPHKGF KQSRPMNLVI  60
ARSPVFTVPP GLSPSGFLNS PGFFSPQSPF GMSHQQALAQ VTAQAVLAQS HMHMQADYHQ  120
LPAVTAPTEP PVQQQSFALN EASEQQVVSS VSEPKNAQLE TSDLSQADKK FQPSSLPIDK  180
PADDGYNWRK YGQKQVKGSE YPRSYYKCTH LNCPVKKKVE RAPDGHITEI IYKGQHNHEK  240
PQANKLPESD QTSNQGAPRQ LLPGSSESEE VGDVDNREEA DDSEPNPKRR NTDVTVTEVP  300
LSQKTVTEPK IIVQTRSEVD LLDDGYRWRK YGQKVVKGNP HPRSYYKCTS AGCNVRKHVE  360
RASTDPKAVI TTYEGKHNHD VPAARNSSHN TASSNPMPLK PHNAAPEKHP LLKDMEFGSN  420
DQRPVHLRLK EEQIIV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-41183383878Probable WRKY transcription factor 4
2lex_A5e-41183383878Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_18758
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU3753550.0EU375355.1 Glycine max transcription factor (WRKY4) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020218833.10.0probable WRKY transcription factor 4
SwissprotQ9ZQ701e-136WRKY3_ARATH; Probable WRKY transcription factor 3
TrEMBLA0A151TCC10.0A0A151TCC1_CAJCA; Putative WRKY transcription factor 3
STRINGXP_007139560.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF154534100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-123WRKY DNA-binding protein 3
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Aamir M, et al.
    Structural and Functional Insights into WRKY3 and WRKY4 Transcription Factors to Unravel the WRKY-DNA (W-Box) Complex Interaction in Tomato (Solanum lycopersicum L.). A Computational Approach.
    Front Plant Sci, 2017. 8: p. 819
    [PMID:28611792]