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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
C.cajan_18602 |
| Common Name | KK1_019145 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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| Family |
MYB |
| Protein Properties |
Length: 214aa MW: 23874.3 Da PI: 9.9017 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| C.cajan_18602 | genome | IIPG | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 59.3 | 8.4e-19 | 31 | 76 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEd +l ++v+++G+++W++I+r++ gR++k+c++rw +
C.cajan_18602 31 KGPWSAEEDRILTRLVERYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 76
79*****************************9.***********985 PP
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| 2 | Myb_DNA-binding | 58.6 | 1.4e-18 | 85 | 127 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+++++Ed+ ++ a++q+G++ W+tIar ++ gRt++ +k++w++
C.cajan_18602 85 PFSPQEDQTIIAAHAQYGNR-WATIARLLP-GRTDNAVKNHWNST 127
89******************.*********.***********986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MNRSSSSTTS SSDSCSSDSN HRNTNNPDRI KGPWSAEEDR ILTRLVERYG PRNWSLISRY 60
IKGRSGKSCR LRWCNQLSPS VQHRPFSPQE DQTIIAAHAQ YGNRWATIAR LLPGRTDNAV 120
KNHWNSTLKR RANQGAASSS APSLHSHFQD DPLTALTLAP PGIASAAAPQ EPLPDHRPSP 180
ETAPPAFWDM MRDVIAREVR EYVSSNFSDN SAFH
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in auxin response. Functions in auxin signal transduction and modulates lateral root growth. Interacts with ARF response factors to promote auxin-responsive gene expression (PubMed:17675404). In response to auxin, binds sequence-specific motifs in the promoter of the auxin-responsive gene IAA19, and activates IAA19 transcription. The IAA19 transcription activation by MYB77 is enhanced by direct interaction between MYB77 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:17675404, ECO:0000269|PubMed:24894996}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by auxin (PubMed:17675404). Down-regulated by potassium deprivation (PubMed:15173595). {ECO:0000269|PubMed:15173595, ECO:0000269|PubMed:17675404}. |
