PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_18285
Common NameKK1_018819
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 526aa    MW: 59640.2 Da    PI: 6.9019
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_18285genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.85.9e-09420469147
                      TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 
                      rg+WT++E+++++d+vk  +       W+   +t++ ++++++++s+++++
    C.cajan_18285 420 RGSWTEQEEKKFKDVVKSNPASldkcFWDHLFKTFP-TKSREDLVSYYFNV 469
                      89******************99**************.***********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5101117.798164IPR001606ARID DNA-binding domain
SuperFamilySSF467742.35E-14266IPR001606ARID DNA-binding domain
SMARTSM005012.9E-4265IPR001606ARID DNA-binding domain
Gene3DG3DSA:1.10.150.609.2E-13370IPR001606ARID DNA-binding domain
PfamPF013883.6E-8360IPR001606ARID DNA-binding domain
SMARTSM011891.6E-5322374IPR000949ELM2 domain
SMARTSM007170.0011419472IPR001005SANT/Myb domain
PfamPF002492.1E-6420469IPR001005SANT/Myb domain
CDDcd001674.23E-4422470No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    Send to blast
MTNGEPLDLY KLFMVVKEKG GYDAVCKNRL WDLVGEEYGL GGKVGSSVEL VYSKHLGALE  60
TCFKNVADEE ERGDEFERRV CECPDGRKLC GTNRVKGVKP ESNVANEVQS EGYVDLDMLD  120
NGANEPIPEN FCSLNTERDI LNVPGVGKIL TVDASDAESD MPMLSDGSKS CDNDDDNNSG  180
EVLILDPSSV DRKSFGRKRK RETKSEMLSW ITSIAKNPCD PAVGSMPEKS KWKSYSSREM  240
WKQALLFRES VFLKKDFQTT TEKLSWQGQK MHPSMYEDRV GGVYSLRQRL KCDKRLLSGN  300
SKSDGVSSSI GTHGDKCARV RVPVGPKHQA EVPKWTDMTY ESDSKWLGTQ IWPLEEVNSK  360
LLVAERDPIG KGRQDSCGCQ VQGSVECVRF HIVKQKSKVK LELGDAFFRW DFHKAGEEVR  420
GSWTEQEEKK FKDVVKSNPA SLDKCFWDHL FKTFPTKSRE DLVSYYFNVF LLQRRAYQNR  480
YTPDNIDSDD DESEFTPLRK IFGHQSQKSR SFTLLSPKKA TDKTAK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_18285
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219574.10.0AT-rich interactive domain-containing protein 1
RefseqXP_020219575.10.0AT-rich interactive domain-containing protein 1
RefseqXP_020219576.10.0AT-rich interactive domain-containing protein 1
RefseqXP_020219577.10.0AT-rich interactive domain-containing protein 1
RefseqXP_029127993.10.0AT-rich interactive domain-containing protein 1
RefseqXP_029127994.10.0AT-rich interactive domain-containing protein 1
TrEMBLA0A151TAZ90.0A0A151TAZ9_CAJCA; Uncharacterized protein
STRINGGLYMA18G46951.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF43731724