PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17750
Common NameKK1_018273
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family AP2
Protein Properties Length: 541aa    MW: 59770.5 Da    PI: 6.1681
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17750genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.11.4e-15213272155
            AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    s+y+GV++++++gr++A+++d  +   g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  C.cajan_17750 213 SQYRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 272
                    78*******************655454478446*************************98 PP
2AP248.22.7e-15315366155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  C.cajan_17750 315 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 366
                    78****************988532...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.13E-22213282No hitNo description
SuperFamilySSF541713.47E-17213282IPR016177DNA-binding domain
PfamPF008474.9E-12213272IPR001471AP2/ERF domain
SMARTSM003801.1E-29214286IPR001471AP2/ERF domain
PROSITE profilePS5103219.177214280IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-16214281IPR001471AP2/ERF domain
PRINTSPR003671.2E-6215226IPR001471AP2/ERF domain
CDDcd000187.82E-25315376No hitNo description
PfamPF008475.4E-10315366IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-18315376IPR016177DNA-binding domain
SMARTSM003803.6E-34316380IPR001471AP2/ERF domain
PROSITE profilePS5103219.006316374IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-18316374IPR001471AP2/ERF domain
PRINTSPR003671.2E-6356376IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    Send to blast
MSNWLGFSLT PHLRIDEEFG RENQERGGGG YPPPPSHPHL SAMPLRSDGS LCVSDSFSHS  60
AAPQEWRYDN AIGGGNSNEE GPKLEDFLGC YSNSPMAESK VFCQDSQHDQ NQGQNNVSKI  120
NVNVAPSFCT NTEIEAGESL TNPSSLLQSF HAYNDNSHAL IPTNGMYKSW LAQTQFSEGK  180
PSAEANGCNF QSLSLTMSPI PRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH LWDNSCRKEG  240
QTRKGRQVYL GGYDKEEKAA RAYDLAALKY WGPTTHINFP LSTYEKELEE MKHMTRQEFV  300
ANLRRKSSGF SRGASVYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA  360
AIKFRGTSAV TNFDISRYDV KRICSSSTLI AGDLAKRSPK DSAPAAAAED FNSCGSSMPA  420
QPPPLAITDG EHSDELSNMM WNANSDEQAQ NESANINNVT ESSQQVSPSN NKDGLNPQSP  480
KCSVGLPNEF GVSGADYGHG YFTLDGPKYD DGNNENDHMN NNRLGNLGLV NQVPMFALWN  540
E
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17750
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2359131e-137AC235913.2 Glycine max clone GM_WBc0225O09, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219986.10.0AP2-like ethylene-responsive transcription factor AIL1
TrEMBLA0A151T9L30.0A0A151T9L3_CAJCA; AP2-like ethylene-responsive transcription factor AIL1
STRINGXP_007135445.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF102743137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.11e-125AP2 family protein