PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_15948
Common NameKK1_016415
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 296aa    MW: 32190.4 Da    PI: 8.3877
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_15948genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.33.6e-29135193259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YYrC+s  gC ++k+vers+++p+++++tY+g+H+h 
  C.cajan_15948 135 ADLWAWRKYGQKPIKGSPYPRNYYRCSSCkGCAARKQVERSTTEPNTFIVTYTGDHKHA 193
                    699***********************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-29120195IPR003657WRKY domain
PROSITE profilePS5081131.284129195IPR003657WRKY domain
SuperFamilySSF1182907.32E-25129195IPR003657WRKY domain
SMARTSM007745.2E-33134194IPR003657WRKY domain
PfamPF031065.4E-24136192IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MNFNPTTTTN TISSTSTITS ALGINPNSTF SDVAGFIGQQ QTQQSHHHHH LVPAPTNYTS  60
IGAPSTTGFD IFHHHQQQPQ TQTQIPEQQK TFQAPQTSPI LSPNTQSQPQ APRPRKRKNQ  120
QKKMVCHVTA DNLSADLWAW RKYGQKPIKG SPYPRNYYRC SSCKGCAARK QVERSTTEPN  180
TFIVTYTGDH KHAKPVHRNS LAGSTRSKPS STRLPETNET GSCSKEENAA CSSTSALSPT  240
SFRSGTPENE AGVAAGEHEP ELGTVPDAQS ENEDDDVLIP NVGAMSDAIL LGLTTK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-171321951577Probable WRKY transcription factor 4
2ayd_A2e-17123195274WRKY transcription factor 1
2lex_A1e-171321951577Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_15948
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150441e-57AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020220978.10.0probable WRKY transcription factor 27
TrEMBLA0A151T4F90.0A0A151T4F9_CAJCA; Putative WRKY transcription factor 27
STRINGGLYMA16G29561.11e-133(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67943249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.13e-47WRKY DNA-binding protein 27