PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_15741
Common NameKK1_016203
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 412aa    MW: 45545.4 Da    PI: 5.7155
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_15741genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.55.4e-1756100147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT+eE++++++a k++G g W+ I +++g ++t+ q++s+ qk+
    C.cajan_15741  56 REKWTEEEHQKFLEALKLYGRG-WRQIEEHIG-TKTAVQIRSHAQKF 100
                      789*******************.*********.************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.21E-1650104IPR009057Homeodomain-like
PROSITE profilePS5129421.20151105IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.6E-1053110IPR009057Homeodomain-like
TIGRFAMsTIGR015573.1E-1654103IPR006447Myb domain, plants
SMARTSM007174.5E-1355103IPR001005SANT/Myb domain
PfamPF002499.9E-155699IPR001005SANT/Myb domain
CDDcd001671.97E-1158101No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007623Biological Processcircadian rhythm
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0046686Biological Processresponse to cadmium ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    Send to blast
MEMQDQIESI RSTIFGSASN GHSSGGKQSE NDAHIPSVGN SHTPKVRKPY TITKQREKWT  60
EEEHQKFLEA LKLYGRGWRQ IEEHIGTKTA VQIRSHAQKF FSKVVRESEV SAESSIQPIN  120
IPPPRPKRKP LHPYPRKSVN SFKGHTISNE TEISPSTNLL VAEKDTPSPT SVLSTVGSEA  180
FGSAFSEQTN RCLSPNSCTT DIHSVNLSPV EKENDCMTSK ASEEEEKGSP ASVPLSTVSN  240
PNTCMKSEFS SKDTECFIED AANMPQTTSI KLFGRTVSTI GNQKSMNLND ENGKPITVKS  300
DELDDVENEK PDQSGESKQV DTQLSLGFNV RSREEESCCT GSNTELVCEM ENQSKNSDVV  360
DSQCQKYNEE GAAPKKPSRG FVPYKRCLAE RDGNSLLVAM EEREGQRARV CS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00146DAPTransfer from AT1G18330Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_15741
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150441e-147AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020220809.10.0protein REVEILLE 7 isoform X1
TrEMBLA0A151T3S20.0A0A151T3S2_CAJCA; Myb-like protein G
STRINGGLYMA16G34340.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF73133244
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18330.11e-62MYB_related family protein