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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_15171 | ||||||||
Common Name | KK1_015609 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | MYB_related | ||||||||
Protein Properties | Length: 204aa MW: 24300.3 Da PI: 9.0259 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.3 | 1.1e-15 | 106 | 149 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rWT +E+ l++d+ +++G+g+Wk I+r++ +++ q+ s+ qky C.cajan_15171 106 RWTDDEHRLFLDGLEKYGKGNWKEISRYIV-TKSKSQVSSHAQKY 149 9*****************************.*************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 15.359 | 99 | 154 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 2.39E-15 | 100 | 154 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 5.2E-9 | 100 | 153 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 6.1E-16 | 102 | 153 | IPR006447 | Myb domain, plants |
SMART | SM00717 | 4.0E-12 | 103 | 152 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 4.68E-11 | 106 | 150 | No hit | No description |
Pfam | PF00249 | 8.9E-13 | 106 | 149 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence Send to blast |
MSLQEQPSNT TTQCKEYIHW TQEQHRQHYH NGGKGPDQGL QIIENELMKD DLEKQCENIE 60 NYTMIFNDYH RLMTNLQEQS FNTVNQVLIK SSEDSPLLVQ RKKFTRWTDD EHRLFLDGLE 120 KYGKGNWKEI SRYIVTKSKS QVSSHAQKYF LRKNAQKKRR SIHDTTLEDI DRKVSSRIYQ 180 QNRVLPTPNC AMQPQNMQQA QYMS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_15171 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A151SZJ6 | 1e-152 | A0A151SZJ6_CAJCA; Myb-like protein J |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13860 | 4 | 14 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10580.2 | 5e-24 | MYB_related family protein |