PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_13480
Common NameKK1_013892
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 428aa    MW: 48826.7 Da    PI: 6.255
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_13480genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix681.9e-2195191185
       trihelix   1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpyfdq 84 
                    +Wt++ v++Li++++ ++++   g            +kk++W+ vs+ m  +g+++sp+qC++k+++lnkryk+++++ +++t ++++++ ++ d+
  C.cajan_13480  95 KWTDNVVRLLITVVSCVGDDGTIGGmdghkrksgvlQKKGKWKTVSRIMIGKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTcCQVVENPVLMDS 190
                    7**************777777765444445556677**********************************************85788888887777 PP

       trihelix  85 l 85 
                    +
  C.cajan_13480 191 M 191
                    7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.9E-1893218No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MNSSGLGGGF LSGPNGGILD LESPFHRHQQ TQLGHPSIAG QQHMNMMGGK AIAPSNPANS  60
NELSEDDEPS YAEEGNCENL DGGKSKKGSP WQRMKWTDNV VRLLITVVSC VGDDGTIGGM  120
DGHKRKSGVL QKKGKWKTVS RIMIGKGCHV SPQQCEDKFN DLNKRYKRLN DILGRGTCCQ  180
VVENPVLMDS MPNLSAKMKD DVRKILSSKH LFYKEMCAYH NGQRIPNSHD LDLQGYSMEH  240
GRDSRDNNGS EDEDEDNNET DDDELDDEIN VNAHEDGGRM QELCDRNKLI EEDGHFGPQT  300
SRMDKFEVEM ARVFQDPTKS SRERREWIKI QMLQLQEQNI SYQAQAFELE KQRLKWLRYC  360
SKKDRELERM RLENKRMKLE NERRILKLKQ KELETDFSTS EMSLDPASLG INRPQPQGRE  420
PISLGRQQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_13480
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020224759.10.0uncharacterized protein LOC109806698
TrEMBLA0A151SUJ70.0A0A151SUJ7_CAJCA; Uncharacterized protein
STRINGGLYMA15G03850.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF105463240
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.12e-94sequence-specific DNA binding transcription factors