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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
C.cajan_13066 |
| Common Name | KK1_013470 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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| Family |
MYB |
| Protein Properties |
Length: 184aa MW: 21141.9 Da PI: 9.0033 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| C.cajan_13066 | genome | IIPG | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 62.8 | 6.9e-20 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT eEd++l+++++ +G ++Wkt+a + g++R++k+c++rw++yl
C.cajan_13066 16 RGAWTSEEDQKLAQCIEIHGAKRWKTVAIKSGLNRCGKSCRLRWLNYL 63
89********************************************97 PP
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| 2 | Myb_DNA-binding | 54 | 3.8e-17 | 69 | 113 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg+ + eE++l+++++k+lG++ W++Ia++++ gRt++++k++w++
C.cajan_13066 69 RGNISVEEEDLIIRLHKLLGNR-WSLIAKRLP-GRTDNEIKNYWNTC 113
78999*****************.*********.***********986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 184 aa
Download sequence Send
to blast |
MATHKNDETA KKTNNRGAWT SEEDQKLAQC IEIHGAKRWK TVAIKSGLNR CGKSCRLRWL 60
NYLRPNIKRG NISVEEEDLI IRLHKLLGNR WSLIAKRLPG RTDNEIKNYW NTCLCKKVNH 120
TKVKAETSMA QPTHSTQNNT EERAVVENKE ANDGSGDSEV NFDVNEFFNF SMEGLYALDW 180
MISS
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| Functional Description ? help
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| Source |
Description |
| UniProt | Controls the expression of genes involved in anthocyanin biosynthesis. Regulates the expression of at least 3 structural genes: chalcone synthase, dihydroflavonol reductase and flavonol O(3) glucosyltransferase. C1 acts as a trans-acting factor. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015043 | 1e-65 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |
| Publications
? help Back to Top |
- Chen B,Wang X,Hu Y,Wang Y,Lin Z
Ectopic expression of a c1-I allele from maize inhibits pigment formation in the flower of transgenic tobacco.
Mol. Biotechnol., 2004. 26(3): p. 187-92
[PMID:15004287] - Paz-Ares J,Ghosal D,Saedler H
Molecular analysis of the C1-I allele from Zea mays: a dominant mutant of the regulatory C1 locus.
EMBO J., 1990. 9(2): p. 315-21
[PMID:2303027] - Cone KC,Burr FA,Burr B
Molecular analysis of the maize anthocyanin regulatory locus C1.
Proc. Natl. Acad. Sci. U.S.A., 1986. 83(24): p. 9631-5
[PMID:3025847] - Paz-Ares J,Ghosal D,Wienand U,Peterson PA,Saedler H
The regulatory c1 locus of Zea mays encodes a protein with homology to myb proto-oncogene products and with structural similarities to transcriptional activators.
EMBO J., 1987. 6(12): p. 3553-8
[PMID:3428265] - Scheffler B, et al.
Molecular analysis of C1 alleles in Zea mays defines regions involved in the expression of this regulatory gene.
Mol. Gen. Genet., 1994. 242(1): p. 40-8
[PMID:7904044] - Franken P,Schrell S,Peterson PA,Saedler H,Wienand U
Molecular analysis of protein domain function encoded by the myb-homologous maize genes C1, Zm 1 and Zm 38.
Plant J., 1994. 6(1): p. 21-30
[PMID:7920701] - Singer T,Gierl A,Peterson PA
Three new dominant C1 suppressor alleles in Zea mays.
Genet. Res., 1998. 71(2): p. 127-32
[PMID:9717435]
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