PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_11926
Common NameKK1_012290
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family B3
Protein Properties Length: 359aa    MW: 41985.8 Da    PI: 4.3385
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_11926genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.69.5e-1811100196
                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
             B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                    ffkv+      +s rl +p++f++ ++++ + + +++l++  gr+W vk    + +++ ++ +GWk F ++n L   Df+vF++dg++ef  +v +
  C.cajan_11926  11 FFKVF--LPEQSSERLLIPNSFVRLINMQGRIPEDVILRNCGGRVWHVKT--GRIGEKLYFDDGWKVFQEENCLGKADFLVFEYDGSNEF--KVLI 100
                    88999..56667778********99988888999****************..*********************************98888..5554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.103.4E-216102IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.51E-197103IPR015300DNA-binding pseudobarrel domain
CDDcd100176.05E-179101No hitNo description
PROSITE profilePS5086312.9579104IPR003340B3 DNA binding domain
PfamPF023623.1E-1511100IPR003340B3 DNA binding domain
SMARTSM010191.9E-1211104IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.4E-7227355IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019365.49E-5306355IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MTTGAKKHPD FFKVFLPEQS SERLLIPNSF VRLINMQGRI PEDVILRNCG GRVWHVKTGR  60
IGEKLYFDDG WKVFQEENCL GKADFLVFEY DGSNEFKVLI LEISTQCEKT VVKMEEEENV  120
EEEAEAQEVD EMEVREEEEH EQVEEGKIED EEDSEDEDYD SDDEDDSAYD NGSDEDSGME  180
EEIEEEHSAG SIGRSYLRAC KRETESSSTP RVEGPLEVYE FDPEMYIQPE NPYFEAKLYK  240
SRRNELHIPG NVIKDFSLTF HEKVTLFCCG CCQRRDFQEI ELREYHLSLA QHAPIRKRYL  300
EVSGEVCRWL DGRVCVKGWL SFCRRNKMTK YDTCLCEIIS GEDQIVRMFR VHVLCSRRG
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_11926
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020217081.10.0B3 domain-containing protein REM20
TrEMBLA0A151TG380.0A0A151TG38_CAJCA; B3 domain-containing protein REM21
STRINGXP_007131904.11e-127(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF128521124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.15e-16B3 family protein