PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_11425
Common NameKK1_011757
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 845aa    MW: 95675 Da    PI: 8.7763
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_11425genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.11.3e-10348392246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g+WT eEd+ l+ +v+ +G ++W  Ia+ +g+ Rt+ qc sr+q 
    C.cajan_11425 348 GAWTNEEDKSLLLVVQDMGIRNWFDIAASLGTSRTPFQCLSRFQR 392
                      79*****************************************96 PP
2Myb_DNA-binding38.62.6e-12402444346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       WT+eEd +l  av+ +G ++W ++a+ +  +Rt+ qc +rw k
    C.cajan_11425 402 EWTEEEDAQLCSAVACFGEKDWQSVASVLE-RRTGTQCSNRWKK 444
                      7*****************************.***********98 PP
3Myb_DNA-binding38.23.3e-12451494146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +g++T eEd +l  av ++G + W++Ia++++ gR   qc++r+++
    C.cajan_11425 451 KGSFTCEEDIRLTVAVMLFGRK-WNLIAKYVP-GRIQSQCRDRYLN 494
                      799*****************99.*********.***********98 PP
4Myb_DNA-binding47.44.3e-15504544345
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       WT+eEd++l  a++++G   W++Ia++++  Rt+ qc+ rw 
    C.cajan_11425 504 GWTEEEDLRLETAIAKHGYC-WSKIAEEVP-PRTDSQCRKRWK 544
                      5*****************99.*********.9**********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.024249343IPR001005SANT/Myb domain
PROSITE profilePS500905.622250339IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.9E-10252268IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.9E-10314353IPR009057Homeodomain-like
SuperFamilySSF466893.11E-16323391IPR009057Homeodomain-like
PROSITE profilePS500909.663342394IPR017877Myb-like domain
SMARTSM007171.4E-9346396IPR001005SANT/Myb domain
CDDcd001678.14E-7349394No hitNo description
PfamPF139211.9E-14350411No hitNo description
Gene3DG3DSA:1.10.10.601.3E-14354407IPR009057Homeodomain-like
PROSITE profilePS5129417.852395450IPR017930Myb domain
SuperFamilySSF466893.35E-22398492IPR009057Homeodomain-like
SMARTSM007175.2E-9399448IPR001005SANT/Myb domain
CDDcd001673.80E-10402446No hitNo description
Gene3DG3DSA:1.10.10.601.0E-16408457IPR009057Homeodomain-like
SMARTSM007179.4E-11450498IPR001005SANT/Myb domain
PROSITE profilePS512948.865451496IPR017930Myb domain
PfamPF002493.0E-11451494IPR001005SANT/Myb domain
CDDcd001672.48E-6453496No hitNo description
Gene3DG3DSA:1.10.10.602.5E-17458501IPR009057Homeodomain-like
SuperFamilySSF466893.86E-23475547IPR009057Homeodomain-like
PROSITE profilePS5129423.189497551IPR017930Myb domain
SMARTSM007173.3E-13501549IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.0E-17502547IPR009057Homeodomain-like
PfamPF002493.5E-14504544IPR001005SANT/Myb domain
CDDcd001671.02E-12505544No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 845 aa     Download sequence    Send to blast
MYHVEKDKIE DLIKQGHLES YTFVTNNFLV VMLKRIVKKE NKGVMDTLQG AGDAIVHAAS  60
DSDSDSDSDS GRDDLECLKR VQSLYQPLAT LPPLEALVTA SDTDDDGVDD LETSFEPDTY  120
ESTGSPQKKS NFHPVVQYFI DAIKQNRDLQ RFLRSKLIAL EAKIEENKQI RNKIKILKDF  180
QASCTRRTGS ALSLKKDPLV QLISAKKSTA PKNSKKKHKK IPAMCYGPEE NSRVANYRMV  240
LERFPLSWDR KKWSKVEREN LSKGIKQQFQ EMVFQVSVDR LSSEVGDAND MDNIIASVKD  300
LEITPERIRE FIPKVNWDQL ASMYVAGRTG AECESRWLNC DDPLINQGAW TNEEDKSLLL  360
VVQDMGIRNW FDIAASLGTS RTPFQCLSRF QRSLNPSMLN SEWTEEEDAQ LCSAVACFGE  420
KDWQSVASVL ERRTGTQCSN RWKKSLCPDK KGSFTCEEDI RLTVAVMLFG RKWNLIAKYV  480
PGRIQSQCRD RYLNSLDPSL KWGGWTEEED LRLETAIAKH GYCWSKIAEE VPPRTDSQCR  540
KRWKVICPEQ VPLLQEARKK QRSVIGSNFV DRESDRPTIT LNDFLPLNAL APKSDDVGAS  600
NRRKKGKSSN VPKKTSSKKR AKRTRLRAKE VQNTDVYSDD EIKTCDEEGP DSACSNVRKK  660
MRPKRHAKNT RRCPKEVVDT SCSDKVNSTC IASSENQDSD KSKRLSRVGN EDLFEKQNDA  720
SDRQVGKPDD ANTLTSDDDD GMTHACFVGN KPKKGSQAAK KRCARSSSKL KKGYALLREG  780
RCASKPTNKS DDSGPSVSRH VEEETVLHGG VAERMDINVE EDDALLSSFL QSRPKRQTKR  840
PSRYL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C1e-283165437155MYB PROTO-ONCOGENE PROTEIN
1h89_C1e-283165437155MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_11425
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150441e-105AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020216682.20.0uncharacterized protein LOC109800301, partial
TrEMBLA0A151TEQ40.0A0A151TEQ4_CAJCA; Myb-like protein L
STRINGGLYMA09G30891.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74413344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.21e-165myb domain protein 4r1