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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_10791 | ||||||||
Common Name | KK1_011103 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | GeBP | ||||||||
Protein Properties | Length: 401aa MW: 44337 Da PI: 4.6377 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 122.3 | 2.4e-38 | 100 | 195 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 lfqrlw++eDei lLqG++d+++++g+s+++d+ fy+++k++++++++k+qlveKirrLKkK+++ +k+ sgke+sf+++hdq +fe+s+kiW C.cajan_10791 100 LFQRLWTDEDEIELLQGFLDYTSQRGSSQHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFSFKSAHDQATFEISRKIWS 195 79*********************************************************************************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 3.3E-35 | 101 | 195 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 401 aa Download sequence Send to blast |
MASQQHDAVF REEDMDDDDE SQEDEEYEED DDEENDPSLS ASAALAVTVA VPGSAVSNGA 60 PAPMSAPSAT TVVVADSSDP KRRRVDQIEE KKPLDDSRRL FQRLWTDEDE IELLQGFLDY 120 TSQRGSSQHN DTALFYDQIK SKLQLDFNKN QLVEKIRRLK KKYRNVLNKI GSGKEFSFKS 180 AHDQATFEIS RKIWSNVAPI GDNSLDDDEI NPSPNTNPNP NPNLNFSPVI LKNEMVFRNS 240 AEKKTPKRPR PRSAPKIEPI DGSASNRDHN CISNATPTVT PTATANATTT GANNNNNNCN 300 SGGYSNNIPS LIEETVRSCL SPVLKELMAG AMGGTFGARA FPFNMSPLPL SFGGAELVDE 360 KWKKQQILEL EVYSKRLELV QDQIKAAMEE LRSSGTGSHT L |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 80 | 84 | KRRRV |
2 | 246 | 250 | KRPRP |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_10791 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020210997.1 | 0.0 | probable transcription factor At3g04930 | ||||
TrEMBL | A0A151TXN0 | 0.0 | A0A151TXN0_CAJCA; Uncharacterized protein | ||||
STRING | GLYMA19G43180.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3255 | 33 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 2e-79 | DNA-binding storekeeper protein-related transcriptional regulator |