PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_10257
Common NameKK1_010553
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TALE
Protein Properties Length: 253aa    MW: 28960 Da    PI: 7.2672
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_10257genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.74.5e-091992322255
                    SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
       Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                     +yp++ee+ +L++ +gL+++q+ +WF N+R ++
  C.cajan_10257 199 WPYPTEEEKVKLSEMTGLDQKQINNWFINQRKRH 232
                    58*****************************885 PP
2ELK28.73e-10153173222
            ELK   2 LKhqLlrKYsgyLgsLkqEFs 22 
                    +K++LlrKYsg+ ++L++EF+
  C.cajan_10257 153 IKEMLLRKYSGHFSGLRKEFL 173
                    7*******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM012559.7E-22448IPR005540KNOX1
PfamPF037901.0E-21647IPR005540KNOX1
SMARTSM012569.3E-2451102IPR005541KNOX2
PfamPF037917.1E-2254101IPR005541KNOX2
PROSITE profilePS512139.498152172IPR005539ELK domain
SMARTSM011881.7E-4152173IPR005539ELK domain
PfamPF037892.3E-8153173IPR005539ELK domain
PROSITE profilePS5007112.244172235IPR001356Homeobox domain
SMARTSM003896.7E-13174239IPR001356Homeobox domain
SuperFamilySSF466895.56E-19174246IPR009057Homeodomain-like
CDDcd000866.89E-13176235No hitNo description
Gene3DG3DSA:1.10.10.604.0E-26177237IPR009057Homeodomain-like
PfamPF059201.8E-16192231IPR008422Homeobox KN domain
PROSITE patternPS000270210233IPR017970Homeobox, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MSDRMMKIQI ANHPLYPDLL SAYIECQKVG APPEVASLLE EIGRESHRMN ARRQIGDGPQ  60
LDHFMETYCE LLHRYKEELS KPFSEATLFL GNMESQLSNL CNGTLTITKS PDNIRSDEVA  120
SGASDEELSC GEIEAVEGHR VSSSVSCPGD QKIKEMLLRK YSGHFSGLRK EFLKQRKKGK  180
LPKDARIALM DWWNTHHRWP YPTEEEKVKL SEMTGLDQKQ INNWFINQRK RHWKPTEDMR  240
FAVSGSIGGP VLL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in shoot formation during early embryogenesis. {ECO:0000269|PubMed:10488233}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_10257
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0959740.0BT095974.1 Soybean clone JCVI-FLGm-20M5 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020210872.10.0homeobox protein knotted-1-like 10 isoform X1
RefseqXP_020210874.10.0homeobox protein knotted-1-like 10 isoform X1
RefseqXP_020210875.10.0homeobox protein knotted-1-like 10 isoform X1
RefseqXP_029126904.10.0homeobox protein knotted-1-like 10 isoform X1
RefseqXP_029126905.10.0homeobox protein knotted-1-like 10 isoform X2
RefseqXP_029126906.10.0homeobox protein knotted-1-like 10 isoform X1
SwissprotQ9FP295e-89KNOS1_ORYSJ; Homeobox protein knotted-1-like 1
TrEMBLA0A151TWA60.0A0A151TWA6_CAJCA; Homeobox protein knotted-1-like 1
STRINGGLYMA03G39041.21e-160(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF62034125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23380.15e-84KNOTTED1-like homeobox gene 6
Publications ? help Back to Top
  1. Park SH, et al.
    A Ds-insertion mutant of OSH6 (Oryza sativa Homeobox 6) exhibits outgrowth of vestigial leaf-like structures, bracts, in rice.
    Planta, 2007. 227(1): p. 1-12
    [PMID:17624547]