PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_08881
Common NameKK1_009140
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 438aa    MW: 47931 Da    PI: 8.4686
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_08881genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.11.3e-12366411655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +++Er RR ri  ++ +L++l Pk+    +k  s a++L +Av+YIk+Lq
  C.cajan_08881 366 SIAERERRTRISARIKKLQDLFPKS----DKQTSTADMLDLAVDYIKDLQ 411
                    689*********************9....788*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.361360410IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-14363423IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.01E-12364415No hitNo description
Gene3DG3DSA:4.10.280.107.3E-14365421IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-11366416IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-9366411IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    Send to blast
MSIVYSHAVK YSQGETRMNP EMDPNIGQHC HQHNSGLTRY RSAPSSLLTS LVNNNNNNIG  60
CVNGEAFRSD HNDHQQQQQN YPPTTSSEME TMLAKLISST NSEPLQVKQE AGDSVSQPPP  120
QNSGYSYGPS PQIMYQTQQI QGLPMPNGSL GASGNAFDGS FSAVSSLPSQ NSTQTKMSAS  180
NHCSNLIRQK SSPAGFFSNY SVDNALRDVA SFRGCDVSNG QAITTTSGLH GTLNFSSRAS  240
SCSTRMPQIA ENGNEGVETN CVESRNLRND NGNSKCYMPS FTSDFWDASA FSASKASNNA  300
EISFSTSNAM DIQDADFGYQ NVGLTHHLSL PSSSTKMATM QKFYQIQGSV PCKIRAKRGF  360
ATHPRSIAER ERRTRISARI KKLQDLFPKS DKQTSTADML DLAVDYIKDL QKQVKMLTDT  420
RAKCTCTSNQ KQYSRPCA
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_08881
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0991790.0BT099179.1 Soybean clone JCVI-FLGm-26J2 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213348.10.0transcription factor bHLH130
TrEMBLA0A151TSC20.0A0A151TSC2_CAJCA; Transcription factor bHLH130 family
STRINGGLYMA13G27455.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40053359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-40bHLH family protein