PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_08648
Common NameKK1_008901
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 326aa    MW: 36884.5 Da    PI: 8.2158
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_08648genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM176.47.8e-5551311129
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                    lppGfrFhPtdeel+++yL++kv++++++  ++i+ vd +k+ePwdLp k++ +ekewyfFs rd+ky+tg r+nrat+sgyWk+tgkdke+++  
  C.cajan_08648   5 LPPGFRFHPTDEELITCYLTRKVSDSSFTS-KAIAVVDFNKSEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIFR-A 98 
                    79*************************999.88***************988999****************************************.9 PP

            NAM  97 gelvglkktLvfykgrapkgektdWvmheyrle 129
                    g lvg+kktLvfy+grap+gek++Wvmheyrle
  C.cajan_08648  99 GVLVGMKKTLVFYRGRAPRGEKSNWVMHEYRLE 131
                    99*****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-633151IPR003441NAC domain
PROSITE profilePS5100559.8735151IPR003441NAC domain
PfamPF023656.9E-296130IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MEENLPPGFR FHPTDEELIT CYLTRKVSDS SFTSKAIAVV DFNKSEPWDL PGKASMGEKE  60
WYFFSLRDRK YPTGLRTNRA TESGYWKTTG KDKEIFRAGV LVGMKKTLVF YRGRAPRGEK  120
SNWVMHEYRL ENKHHFRPSK DEWVVCRVFQ KSLQVKKPQQ ITPSSQPESP CDTTSMVNEF  180
GDVEFTNLNN IANSSCGLNN ISEQTFNADI SNNSVNRNMN LTMNWPVASE VPSLPSLTWP  240
SGLINPSISV NSLLLKALQL RSYQQREAVA AVATNHFASA ASYMPHGGSH VGTDLTSNFT  300
ASSSRVLECM PQQQQQEQPF HLDSIW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-56415716171NO APICAL MERISTEM PROTEIN
1ut4_B2e-56415716171NO APICAL MERISTEM PROTEIN
1ut7_A2e-56415716171NO APICAL MERISTEM PROTEIN
1ut7_B2e-56415716171NO APICAL MERISTEM PROTEIN
3swm_A3e-56415719174NAC domain-containing protein 19
3swm_B3e-56415719174NAC domain-containing protein 19
3swm_C3e-56415719174NAC domain-containing protein 19
3swm_D3e-56415719174NAC domain-containing protein 19
3swp_A3e-56415719174NAC domain-containing protein 19
3swp_B3e-56415719174NAC domain-containing protein 19
3swp_C3e-56415719174NAC domain-containing protein 19
3swp_D3e-56415719174NAC domain-containing protein 19
4dul_A2e-56415716171NAC domain-containing protein 19
4dul_B2e-56415716171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00364DAPTransfer from AT3G18400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_08648
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213810.10.0NAC domain-containing protein 100
TrEMBLA0A151TRN30.0A0A151TRN3_CAJCA; Protein CUP-SHAPED COTYLEDON 2
STRINGGLYMA07G10240.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49463356
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-109NAC domain containing protein 58