PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_08309
Common NameKK1_008555
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 236aa    MW: 26807.2 Da    PI: 8.7287
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_08309genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.31.3e-32159217159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                    ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+
  C.cajan_08309 159 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHS 217
                    59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.3E-34144217IPR003657WRKY domain
SuperFamilySSF1182906.93E-29151218IPR003657WRKY domain
PROSITE profilePS5081129.585154219IPR003657WRKY domain
SMARTSM007744.0E-37159218IPR003657WRKY domain
PfamPF031062.0E-25160216IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1901141Biological Processregulation of lignin biosynthetic process
GO:1904369Biological Processpositive regulation of sclerenchyma cell differentiation
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MMSTTSQTNV NQSLFEEQDQ ISTQMGFIPF PPNQTFPPLG CHQSLKPIGA IVPSLSSETA  60
SSAANFAETL LSTAIQRPRE DLTSSFGGGE GQLLSLNRSR VNSWAWEEVT DCLMGKRIGG  120
DDNHHHLGVS SMKMKKVKAR RKVREPRFCF KTMSDVDVLD DGYKWRKYGQ KVVKNTQHPR  180
SYYRCTQDNC RVKKRVERLA EDPRMVITTY EGRHAHSPSN ELEDSQSPSE LSNFFW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-27150216874Probable WRKY transcription factor 4
2lex_A7e-27150216874Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_08309
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0195811e-171EU019581.1 Glycine max WRKY45 (WRKY45) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213068.11e-180probable WRKY transcription factor 13 isoform X2
SwissprotQ9SVB78e-62WRK13_ARATH; Probable WRKY transcription factor 13
TrEMBLA0A151TQX11e-179A0A151TQX1_CAJCA; Putative WRKY transcription factor 13
STRINGXP_007137585.11e-144(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40793361
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.19e-54WRKY DNA-binding protein 13