PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_08248
Common NameKK1_008494
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 262aa    MW: 29017.8 Da    PI: 6.9576
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_08248genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.57.2e-09202230129
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar 29 
                      r++W++eEd +l  av+++G g+W+t a+
    C.cajan_08248 202 RKAWSEEEDMQLRAAVQRWGEGNWATMAK 230
                      789***********************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.829197230IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.607.4E-9198235IPR009057Homeodomain-like
SuperFamilySSF466898.61E-7200230IPR009057Homeodomain-like
PfamPF002496.4E-7202230IPR001005SANT/Myb domain
CDDcd116609.61E-7203238No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MPEMKTKNAP FTEEDAATLI QRYDATTVFT LLQEVAHHPH PKIDWKELVK KSATGISNAR  60
EYQMLWRHLA YRHSLPESFE DGTEPLDDDS DLEFEVETLP PVSVESASEA AACVKVMIAS  120
RTLSESAPSS STIEAPLNIN VPVCHSSRTP IESSQPSNLM QGTSIIFPVT VLRQTLPPSA  180
SSTDGAETKG FISGNMASKR KRKAWSEEED MQLRAAVQRW GEGNWATMAK GDNFPIKRKV  240
LASGHVHQDG KKKCKKEKTA RV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1236255KRKVLASGHVHQDGKKKCKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_08248
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150351e-100AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006578283.11e-150uncharacterized protein LOC100805773 isoform X2
TrEMBLA0A151TQF20.0A0A151TQF2_CAJCA; Uncharacterized protein
STRINGGLYMA04G10185.11e-147(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31223256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.11e-57MYB_related family protein