PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_08119
Common NameKK1_008363
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family B3
Protein Properties Length: 128aa    MW: 14925.6 Da    PI: 4.3985
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_08119genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.21.7e-143751795
                   E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
             B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                    +p+kfa ++g+    +  + ++ ++g +W+v+   + + g+++l+kGWk+Fv+   L++g  + F+++g+s     v 
  C.cajan_08119  3 KIPNKFAMRYGSG--LPNPVFIKPPDGTEWKVYW--TTQNGEVWLEKGWKQFVEHYSLDQGHLIFFEYQGTSHI--DVL 75
                   59********755..5556***************..999999*************************9986544..444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086313.338180IPR003340B3 DNA binding domain
SMARTSM010190.0028180IPR003340B3 DNA binding domain
SuperFamilySSF1019364.71E-18387IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.9E-18380IPR015300DNA-binding pseudobarrel domain
CDDcd100171.92E-12478No hitNo description
PfamPF023624.3E-12471IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
LQKIPNKFAM RYGSGLPNPV FIKPPDGTEW KVYWTTQNGE VWLEKGWKQF VEHYSLDQGH  60
LIFFEYQGTS HIDVLIHDQS SLEIEYPYCD EKDNIDDNND DVILDEWPDQ KSKHITGNGS  120
SFLSFLIS
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_08119
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020211028.25e-81LOW QUALITY PROTEIN: putative B3 domain-containing protein Os03g0621600
TrEMBLA0A151TQC87e-90A0A151TQC8_CAJCA; B3 domain-containing protein At1g49475 family (Fragment)
STRINGGLYMA20G24268.12e-49(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.14e-19B3 family protein