PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_07341 | ||||||||
Common Name | KK1_007544 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | MYB_related | ||||||||
Protein Properties | Length: 305aa MW: 34015.6 Da PI: 8.7451 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.7 | 2.4e-12 | 50 | 94 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+ E++++++a +++ + Wk+I + +g +t q++s+ qky C.cajan_07341 50 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 94 789*****************77.*********.*************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.92E-16 | 44 | 100 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 14.18 | 45 | 99 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 6.1E-6 | 48 | 100 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.4E-18 | 48 | 97 | IPR006447 | Myb domain, plants |
SMART | SM00717 | 6.5E-10 | 49 | 97 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 4.4E-10 | 50 | 94 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 1.11E-7 | 52 | 95 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009723 | Biological Process | response to ethylene | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0009739 | Biological Process | response to gibberellin | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0046686 | Biological Process | response to cadmium ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence Send to blast |
MMVSKNPNPS EAFYLDPSAM SLPGILPFAG DSLEDPAKKT RKPYTITKSR ESWTEPEHDK 60 FLEALQLFDR DWKKIEAFVG SKTVIQIRSH AQKYFLKVQK SGTSEHLPPP RPKRKAAHPY 120 PQKASKNAPV LSQVSGSFQS SSALLEPGYI IKPDSSAMLR TPIINTAVSS WSNNSLQETT 180 NVLHGKKVNN CCSSSESPRA QLVGESNCRG NINSHPLRGK VLPDFAEVYN FIGSVFDPKE 240 TGHLQKLKGM DPIDVETVLL LMRNLSINLT SPDFEDHRRL LASYEVESET DNYINMLDVQ 300 LKSAT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00560 | DAP | Transfer from AT5G52660 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_07341 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020236024.1 | 0.0 | protein REVEILLE 6 isoform X1 | ||||
Swissprot | Q8H0W3 | 1e-119 | RVE6_ARATH; Protein REVEILLE 6 | ||||
TrEMBL | A0A151U6K4 | 0.0 | A0A151U6K4_CAJCA; Myb-like protein G | ||||
STRING | GLYMA10G37520.2 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1119 | 33 | 96 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.2 | 1e-101 | MYB_related family protein |
Publications ? help Back to Top | |||
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