PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_07197
Common NameKK1_007399
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 1302aa    MW: 142126 Da    PI: 6.2229
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_07197genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.43.3e-08681722346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +WT eE e +++ ++ +G++ +++Ia+ +  ++t  +c+++++k
    C.cajan_07197 681 PWTSEEREVFLEKFAAFGKD-FRKIASFLD-HKTTADCVEFYYK 722
                      8*****************99.*********.***********98 PP
2Myb_DNA-binding31.83.4e-10880918444
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      WT +E   +++av  +G++ +++Iar++  +R+++qck ++
    C.cajan_07197 880 WTDDEKAAFLQAVSSFGKD-FAKIARCVR-TRSEEQCKVFF 918
                      *****************99.*********.********766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.98E-14665725IPR009057Homeodomain-like
PROSITE profilePS5129316.264677728IPR017884SANT domain
SMARTSM007174.4E-8678726IPR001005SANT/Myb domain
PfamPF002491.3E-5680722IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.8E-5681722IPR009057Homeodomain-like
PROSITE profilePS5129311.368874926IPR017884SANT domain
SMARTSM007172.9E-7876924IPR001005SANT/Myb domain
CDDcd001672.55E-8880918No hitNo description
SuperFamilySSF466892.42E-9880926IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.8E-6880918IPR009057Homeodomain-like
PfamPF002491.6E-8880918IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1302 aa     Download sequence    Send to blast
MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSSHHRDF NRWGSAEFRR PPGHGKQGGW  60
HLFSEESAHG YGISRSSSDK ILEEDSRPSI SRGDGKYGRS SRDNRGPFGQ RDWRGHSWEP  120
NNGSLSFPRR PPDANNDTRA VDDALAYSSH PHSDFGNAWD QHHMKDQHDK MGGANGLGAG  180
PRCDRENSLG DWKPLKWTRS GSLSSRGSGF SHSSSSRSMG GADSHEMKAE FQPKSAAANE  240
SHSGEAAACA TSSLPSEDAT SRKKPRLNWG EGLAKYEKKK VEVPDTNANK DGPVLSAGNT  300
EPCNFLSPSL VEKSPKVAGF SECASPATPS SVACSSSPAG MDDKLFGKTA NVDNDVSNLT  360
LSPAPVSENH LQRFSFNLEK FDIGSLNNLG SSIIELVQSD DPTSVDSGPM RSNAINKLLI  420
WKADISKVLE MTESEIDLLE NELKSLKSKS VNTCPSVKGL VPCTTRKAAT VSACVDGNTC  480
MEQKDSMDVL YNTIISSNKE SANRASEVFA KLLPNDCCKI GKMGASSDPC THTFIMEKFA  540
EKKRFARFKE RVIALKFRAL HHLWKEDMRL LSIKKCRPKS HKKNELSVRT TCNGSQKNRS  600
SLRSRFPFPA GNQLSLVPTS EIISFTSKLL SESQVKVQRS TLKMPSLILD EKEKITSKFV  660
TSNGLVEDPL AIEKERTMIN PWTSEEREVF LEKFAAFGKD FRKIASFLDH KTTADCVEFY  720
YKNHKSDCFE KLKKQNVDKL GKSFSAKTDM VASGKKWTRE LNAASLEILS AASLMADGIA  780
VKASRGEDFI EKSSSFDILG DERETAAAAD VLAGICGSLS SEAMSSCITS SVDPVEGNRD  840
RKFLKVSPLC KPPMTPDVTQ DIDDETCSDE SCGEMDPIDW TDDEKAAFLQ AVSSFGKDFA  900
KIARCVRTRS EEQCKVFFSK GRKCLGLDLM RPIPENVGSP VNDDANGGES DTDDACVVET  960
GSAETNGTEV DLEDANVVLD VCAINSESER DSRQATIIMS DSTEVGKDKA NKLGGEASEL  1020
ISAPDVSEPC ESNSVAEDRV VISEVSSGGL GNELERQRVS SPSCLDRDNK HEADSGTELP  1080
LLSQKIEQVD GHTKTLQSSD SDKTSRNGDV KLFGKILTNS SSAQKPSVGA KGSEENDGNL  1140
KILKFDRSDY VGLENVPMRS YGYWDGNRIQ TGLSSLPDSA ILLAKYPAAF SNYPTSSAKL  1200
EQQPSLQAFS KNNERLLNDV KHCQDVFSEM QRRNGFEAIS SLQQQGRGMM GMNGVGRPGI  1260
VVGGSCSGVS DPVAAIKMHY SNSGGQTGSI AREDESWGGK GD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4a69_C2e-16639730494NUCLEAR RECEPTOR COREPRESSOR 2
4a69_D2e-16639730494NUCLEAR RECEPTOR COREPRESSOR 2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_07197
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020227569.10.0uncharacterized protein LOC109808826 isoform X1
RefseqXP_020227576.10.0uncharacterized protein LOC109808826 isoform X2
TrEMBLA0A151U6650.0A0A151U665_CAJCA; Nuclear receptor corepressor 1
STRINGGLYMA20G31871.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49863352
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52250.13e-94MYB family protein