PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_06845 | ||||||||
Common Name | KK1_007037 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | bHLH | ||||||||
Protein Properties | Length: 332aa MW: 36885.9 Da PI: 5.2594 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.6 | 9.2e-13 | 132 | 183 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P + + ++ + a+i A++++k+L+ C.cajan_06845 132 QRMTHIAVERNRRKQMNEYLSVLRSLMPDS---YIQRGDQASIIGGAINFVKELE 183 79****************************...9******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.28E-13 | 130 | 187 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.0E-13 | 130 | 187 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.31E-15 | 131 | 194 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.434 | 131 | 182 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 7.0E-10 | 132 | 183 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.8E-9 | 137 | 188 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence Send to blast |
MALEAVVFSQ SQDPFGGYGS SVKDFYNCTL LASPNWGDYE PHINTEEEEE QGSIISTFLD 60 NSNNNNNNNN NNNPYGDWTT SSSSSMLPHL NDPQETTDPN NSHNLDTLTT TITRPKRRRA 120 KSRKNKEEIE NQRMTHIAVE RNRRKQMNEY LSVLRSLMPD SYIQRGDQAS IIGGAINFVK 180 ELEQRLHFLG AKKEGEGKSD GGGANGNMPF SEFFTFPQYS TSGGGTDNSA AKGEDVGEVQ 240 SGIADIEVTM VESHANLKIR SKKRPKQLLK LVSGLHTMRL TILHLNVTTT GEVVLYSLSV 300 KVEDDCKLGS VDDIAAAVYQ MLDRIQQEAM LN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 143 | RMTHIAVERNRR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_06845 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT093468 | 0.0 | BT093468.1 Soybean clone JCVI-FLGm-14K7 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020207714.1 | 0.0 | transcription factor bHLH94 | ||||
Swissprot | Q9C7T4 | 6e-80 | BH096_ARATH; Transcription factor bHLH96 | ||||
TrEMBL | A0A151U4W0 | 0.0 | A0A151U4W0_CAJCA; Transcription factor bHLH96 | ||||
STRING | XP_007144754.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF718 | 34 | 135 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 4e-78 | bHLH family protein |
Publications ? help Back to Top | |||
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