PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_06494
Common NameKK1_006682
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 280aa    MW: 30403.5 Da    PI: 9.0101
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_06494genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding63.15.6e-201257147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEde l ++v+++G+++W++I+r ++ gR++k+c++rw + 
    C.cajan_06494 12 KGPWSPEEDEALQKLVERHGPRNWSLISRSIP-GRSGKSCRLRWCNQ 57
                     79******************************.***********985 PP
2Myb_DNA-binding55.99.8e-1866108347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+eEde +++a++++G++ W+tIar +  gRt++ +k++w++ 
    C.cajan_06494  66 AFTPEEDETIIRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 108
                      79******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129427.528762IPR017930Myb domain
SuperFamilySSF466892.52E-329105IPR009057Homeodomain-like
SMARTSM007171.9E-171160IPR001005SANT/Myb domain
PfamPF002495.1E-191257IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.1E-261365IPR009057Homeodomain-like
CDDcd001676.79E-171456No hitNo description
SMARTSM007171.2E-1463111IPR001005SANT/Myb domain
PROSITE profilePS5129421.22964113IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.8E-2366112IPR009057Homeodomain-like
CDDcd001672.81E-1266109No hitNo description
PfamPF002495.8E-1566108IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0010200Biological Processresponse to chitin
GO:0046686Biological Processresponse to cadmium ion
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MAVNRKDMDR IKGPWSPEED EALQKLVERH GPRNWSLISR SIPGRSGKSC RLRWCNQLSP  60
QVEHRAFTPE EDETIIRAHA RFGNKWATIA RLLSGRTDNA IKNHWNSTLK RKCASIMIAD  120
DRPFKRSVSA GAALPLSPGS PSGSDVSESS APGVLSPSHV FRPVPLRPTV ETASSSDDGP  180
TTSLSLSLPG VESSEVSNRA VAVAAPVIPV AAMPVSSSAV EVGLGAMNLS AEFMAVMHEM  240
IRTEVRSYME QQNQNGMCFE GVDGFRNVSV KRIGISRVDS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mse_C4e-41111123104C-Myb DNA-Binding Domain
1msf_C4e-41111123104C-Myb DNA-Binding Domain
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00476DAPTransfer from AT4G37260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_06494
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150341e-130AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020210181.10.0transcription factor MYB44
SwissprotO231602e-96MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A151U4240.0A0A151U424_CAJCA; Transcription factor MYB44
STRINGXP_007155887.11e-168(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84334124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.12e-81myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]