PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_06252
Common NameKK1_006425
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 477aa    MW: 52257.7 Da    PI: 6.4308
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_06252genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix60.93.2e-1997183186
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                    +W++  + +L+ea++e+ ++l+rg+l++ +Weev++++  r +  ++s +qCk+k +nl+kryk ++++++++ + s+s +p+f+qle
  C.cajan_06252  97 EWSDTAIECLLEAYTEKFTQLNRGNLRGRDWEEVAAVVseRCENQSKSVEQCKNKVDNLKKRYKLERHRMSSG-CISTSLWPWFKQLE 183
                    5*************************************666677899*************************9.99999********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.8E-2095185No hitNo description
Gene3DG3DSA:3.40.1160.109.7E-69231470IPR001048Aspartate/glutamate/uridylate kinase
HamapMF_01220_B32.915236471IPR015963Uridylate kinase, bacteria
SuperFamilySSF536332.62E-56237470IPR001048Aspartate/glutamate/uridylate kinase
CDDcd042541.35E-107239471No hitNo description
PfamPF006961.5E-25240450IPR001048Aspartate/glutamate/uridylate kinase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006221Biological Processpyrimidine nucleotide biosynthetic process
GO:0046939Biological Processnucleotide phosphorylation
GO:0005737Cellular Componentcytoplasm
GO:0033862Molecular FunctionUMP kinase activity
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    Send to blast
MASCDDDDDF SLLRDDNHHL HQPYAPHHHF SPAAVPVPPK PVSEDYANPF DDDGASEKRK  60
DRDEIGEGAS SYGFNKRSKP PSSAAAAAAE YRKDREEWSD TAIECLLEAY TEKFTQLNRG  120
NLRGRDWEEV AAVVSERCEN QSKSVEQCKN KVDNLKKRYK LERHRMSSGC ISTSLWPWFK  180
QLEQIVGNSL SAKFSDEDKA VVSAGTSPRQ SKRYGVATPT TGGQANSMKS KALSNLRWRR  240
VVLKISGAAL TGSDTCNIDP KVAMLVSREV AIASRLGVEV AIVVGGRNFF SGDAWVTATG  300
LERCTAYQVG MMATVMNSIL LQSTLEKMGV QTRVQTSVAM QEFAEPYNRQ RAIRHLEKGR  360
VVIFGGIGFG AGNPLFSTDV ATALRASELN AEAVLKGTNV DGVYDCNSRD NNFTFEHISF  420
RELGSRGVTS MDMSALTFCE ENSIPVVVFN LLEPGNISKA LCGEQVGTLI DQTGAIS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ek5_A3e-612304701239Uridylate kinase
3ek5_B3e-612304701239Uridylate kinase
3ek5_C3e-612304701239Uridylate kinase
3ek5_D3e-612304701239Uridylate kinase
3ek5_E3e-612304701239Uridylate kinase
3ek5_F3e-612304701239Uridylate kinase
3ek6_A3e-612304701239Uridylate kinase
3ek6_B3e-612304701239Uridylate kinase
3ek6_C3e-612304701239Uridylate kinase
3ek6_D3e-612304701239Uridylate kinase
3ek6_E3e-612304701239Uridylate kinase
3ek6_F3e-612304701239Uridylate kinase
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00340DAPTransfer from AT3G10030Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_06252
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150411e-158AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020202449.10.0uncharacterized protein LOC109788187
TrEMBLA0A151U3970.0A0A151U397_CAJCA; Uridylate kinase
STRINGXP_007145266.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40623252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10030.10.0Trihelix family protein