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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
C.cajan_05912 |
Common Name | KK1_006061 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family |
C2H2 |
Protein Properties |
Length: 360aa MW: 41801.6 Da PI: 8.2953 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
C.cajan_05912 | genome | IIPG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 17.7 | 9.8e-06 | 64 | 85 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23
+C+ Cg +F+ + +L +H+++H
C.cajan_05912 64 TCEECGATFKKHAYLLQHMQSH 85
6*******************99 PP
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2 | zf-C2H2 | 15.1 | 6.4e-05 | 91 | 115 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23
+ C+ dC ++rk++L+rH+ H
C.cajan_05912 91 FACTvdDCQANYRRKDHLTRHLLQH 115
789999***************9887 PP
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3 | zf-C2H2 | 12.1 | 0.00058 | 120 | 145 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23
+kCp +C+ Fs + n+krH H
C.cajan_05912 120 FKCPveNCNIEFSLHGNMKRHVEEiH 145
89*******************98777 PP
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4 | zf-C2H2 | 16.4 | 2.5e-05 | 160 | 184 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23
++C+ Cgk+F+ s L++H +H
C.cajan_05912 160 FVCSeiGCGKVFRYASRLQKHEGSH 184
89*******************8666 PP
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Protein Features
? help Back to Top |
 |
Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
PROSITE profile | PS50157 | 8.704 | 19 | 46 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 17 | 19 | 41 | IPR015880 | Zinc finger, C2H2-like |
SuperFamily | SSF57667 | 6.71E-10 | 62 | 115 | No hit | No description |
PROSITE profile | PS50157 | 13.339 | 63 | 90 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.01 | 63 | 85 | IPR015880 | Zinc finger, C2H2-like |
Gene3D | G3DSA:3.30.160.60 | 2.6E-8 | 64 | 90 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
PROSITE pattern | PS00028 | 0 | 65 | 85 | IPR007087 | Zinc finger, C2H2 |
Gene3D | G3DSA:3.30.160.60 | 7.3E-10 | 91 | 117 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
PROSITE profile | PS50157 | 9.764 | 91 | 120 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.045 | 91 | 115 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 93 | 115 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 3.68E-6 | 118 | 146 | No hit | No description |
Gene3D | G3DSA:3.30.160.60 | 2.6E-5 | 118 | 146 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
SMART | SM00355 | 0.0068 | 120 | 145 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.265 | 120 | 150 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 122 | 145 | IPR007087 | Zinc finger, C2H2 |
Gene3D | G3DSA:3.30.160.60 | 6.2E-7 | 157 | 184 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
PROSITE profile | PS50157 | 11.053 | 160 | 189 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.003 | 160 | 184 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 162 | 184 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.64 | 192 | 217 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 194 | 217 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 27 | 220 | 241 | IPR015880 | Zinc finger, C2H2-like |
Gene3D | G3DSA:3.30.160.60 | 1.9E-5 | 231 | 272 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
SuperFamily | SSF57667 | 3.59E-8 | 232 | 289 | No hit | No description |
PROSITE profile | PS50157 | 12.861 | 250 | 280 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.057 | 250 | 275 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 252 | 275 | IPR007087 | Zinc finger, C2H2 |
Gene3D | G3DSA:3.30.160.60 | 9.5E-6 | 274 | 304 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
SMART | SM00355 | 6.5 | 281 | 307 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 283 | 307 | IPR007087 | Zinc finger, C2H2 |
Sequence ? help Back to Top |
Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MVEAMEREET PKFRDIRRYI CEFCGICRSK KALITSHINS HHKEEAEKAE AEKDPQSDPV 60 KSNTCEECGA TFKKHAYLLQ HMQSHSLERP FACTVDDCQA NYRRKDHLTR HLLQHQGKTF 120 KCPVENCNIE FSLHGNMKRH VEEIHDDSST SIWDKSPKQF VCSEIGCGKV FRYASRLQKH 180 EGSHVKLESV DVMCLEPGCM KHFTNVQCLQ AHVKSSHQYK TCDICGTKQL KKNIKRHLRS 240 HEASSSSETF QCEFKGCCCT FSTKSNLDKH KKVVHFKEKP FVCGFPDCGM RFAYKHVRDN 300 HEKTAKHVFT LGDFEEGDEE FRSRPRGGRK GECPTVEMLI RKRVPPPSQL ENWLFMQDRE
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Functional Description ? help
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Source |
Description |
UniProt | Essential protein (PubMed:22353599). Isoform 1 is a transcription activator the binds both 5S rDNA and 5S rRNA and stimulates the transcription of 5S rRNA gene (PubMed:12711688, PubMed:22353599). Isoform 1 regulates 5S rRNA levels during development (PubMed:22353599). {ECO:0000269|PubMed:12711688, ECO:0000269|PubMed:22353599}. |