PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_05822
Common NameKK1_005967
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 315aa    MW: 35754.1 Da    PI: 7.6724
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_05822genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.13.6e-33166223259
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                    +Dgy+WrKYGqK vk+s++prsYYrCts++C vkk+vers +dp++v++tYeg+Hnh+
  C.cajan_05822 166 EDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCGVKKRVERSFQDPSIVITTYEGQHNHH 223
                    8********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.0E-35150225IPR003657WRKY domain
SuperFamilySSF1182903.53E-29158225IPR003657WRKY domain
PROSITE profilePS5081132.156160225IPR003657WRKY domain
SMARTSM007746.7E-39165224IPR003657WRKY domain
PfamPF031062.1E-26166223IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MANEKDHYYD PFHYNHSSSS FPFFRDNNST QNFQGFDHNN PSPHTTFTDC LHGSMDYNTL  60
SRAFDLSCSS SEVISSIDEN PKKNPSAGDS AVGNQSTPNS SVSSSSNEAE AVIEEDSTKS  120
LKNKQPKGCD DGDEKPKKEN KAKKKEKKPR EPRFAFLTKS EIDHLEDGYR WRKYGQKAVK  180
NSPYPRSYYR CTSQKCGVKK RVERSFQDPS IVITTYEGQH NHHCPATLRG SAASMLSSPS  240
FYGSSYMGST LPQDFLSQFL PSYSQNDHQN SVFHHQNLSH NLHPQPQQQQ QQFQLSRDYG  300
LLQDLLPSFQ GKQEP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-301582261078Probable WRKY transcription factor 4
2lex_A7e-301582261078Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_05822
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150369e-99AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020204261.10.0WRKY transcription factor 71
TrEMBLA0A151U2170.0A0A151U217_CAJCA; Putative WRKY transcription factor 28
STRINGGLYMA14G03280.11e-154(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22313483
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.12e-51WRKY DNA-binding protein 71