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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
C.cajan_05797 |
| Common Name | KK1_005942 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
|
| Family |
bHLH |
| Protein Properties |
Length: 483aa MW: 53961.9 Da PI: 6.574 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| C.cajan_05797 | genome | IIPG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 52.6 | 8e-17 | 279 | 325 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn ErrRRdriN+++ L++l+P++ K +Ka++Le+A+eY+ksLq
C.cajan_05797 279 VHNLSERRRRDRINEKMRALQQLIPNS-----NKTDKASMLEEAIEYLKSLQ 325
6*************************7.....5******************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009704 | Biological Process | de-etiolation |
| GO:0010161 | Biological Process | red light signaling pathway |
| GO:0010244 | Biological Process | response to low fluence blue light stimulus by blue low-fluence system |
| GO:0010600 | Biological Process | regulation of auxin biosynthetic process |
| GO:0010928 | Biological Process | regulation of auxin mediated signaling pathway |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 483 aa
Download sequence Send
to blast |
MNNSIRGWDF ESDTCLNNQR KLVRPDQEFV ELLWQNGQVV MHSQTHKQPV GNSSNLRQVQ 60
KTDQSTLRTS GPYENSSKLD QENAAPWIQY PFEDPSEQEF CSNLLPELPP CEVESYKPIR 120
QMEEGKNANF FASSAPHLTS ISQPLPPNMK PSTSQKTSAN TSQGEAGEYS VITVGSSHCG 180
SNNIPQDQDV SRISSNVHRS DKGKSEMIEP TVTSSSGRSG STGIGRTCSL STRDHGLKRK 240
GTEEEASEEQ SEATELKSAD ENKTSQRTGS SRRNRAAEVH NLSERRRRDR INEKMRALQQ 300
LIPNSNKTDK ASMLEEAIEY LKSLQFQLQV MWMGTGMTPI MFPGIQHYMS QMGLVAPSLP 360
SIHNHMQFPK LAHDQTQMPN QTLMCQNPVL GAFNYQNQMQ NPCLSEQYAR YMGYHLMQSP 420
SQAMNASRYG SEAVQHSQTM IAPTNNSSGP MSGTANVDDA VSGKTSKPLD TFNLFLDFYS 480
QQL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015036 | 1e-31 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |
