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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_05144 | ||||||||
Common Name | KK1_005273 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | WRKY | ||||||||
Protein Properties | Length: 231aa MW: 26096.7 Da PI: 6.9212 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 77.6 | 1.5e-24 | 135 | 195 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDg+ WrKYG K++ +s+f rsY+rCt++ gC+++k+v+r++e+p++ +itY g H+++ C.cajan_05144 135 DDGHVWRKYGEKQILNSKFLRSYFRCTYKfdqGCKATKQVQRCEENPDMYQITYIGLHTCN 195 8***************************9999***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 5.9E-25 | 128 | 195 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 18.429 | 129 | 197 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.27E-24 | 131 | 195 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.2E-36 | 134 | 196 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.4E-24 | 135 | 194 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MFLESESMII VKERVIMEEL VKGQEAATQL KGLLENPIGS EDFLSPEQLL ENVLSSFSQT 60 ISIIKASSFQ PPPPVPAPAP APAPHVLGSA SYSTSGDDSV NWNRSQQGQS DERDSHSIRK 120 GKGAQTWTAV LKTTDDGHVW RKYGEKQILN SKFLRSYFRC TYKFDQGCKA TKQVQRCEEN 180 PDMYQITYIG LHTCNASLLN RLYINLLPSI NIFFELITYT KNFILTTNYI F |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 7e-26 | 128 | 194 | 2 | 68 | OsWRKY45 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_05144 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020210665.1 | 1e-150 | probable WRKY transcription factor 70 isoform X1 | ||||
TrEMBL | A0A151U074 | 1e-173 | A0A151U074_CAJCA; Putative WRKY transcription factor 70 | ||||
STRING | GLYMA14G36446.1 | 1e-53 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4700 | 30 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 5e-32 | WRKY DNA-binding protein 70 |