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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
C.cajan_04496 |
| Common Name | KK1_004608 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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| Family |
GRAS |
| Protein Properties |
Length: 545aa MW: 60720.6 Da PI: 6.3645 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| C.cajan_04496 | genome | IIPG | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 408.6 | 5.9e-125 | 177 | 545 | 4 | 374 |
GRAS 4 lLlecAeavssgdlelaqalLar.lselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
+L cA+avs++d a+ + + l ++s +gdp+qRl ay++e+L+arl +s++ +yk+l++++ + s+e +++++++++++P+ kf+++ a
C.cajan_04496 177 VLKVCAQAVSDDDIPIARGWMDNvLGRMVSVSGDPIQRLGAYLLEGLRARLESSGNLIYKSLKCEQPT---SQELMSYMHILYQICPYWKFAYISA 269
6788***************998626777***************************************9...999999******************* PP
GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlele 192
N I ea+++e+r+HiiDf+i qG+QW L+qaLa Rp+gppslR+Tgv++++s + l+ +gerL+++A+++gvpfef+ +a + d+
C.cajan_04496 270 NAVIEEAMANESRIHIIDFQIAQGTQWYLLIQALAHRPGGPPSLRVTGVDDSQSIhaRGGGLQIVGERLTDYARSCGVPFEFHS-AAISGCDVVRG 364
***************************************************9988889999***********************.67677777799 PP
GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288
++++++gEalaVn+ + lh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F++rf+e+l+yy+a+f+s+++ pr++++ri+ E++
C.cajan_04496 365 NIEIRHGEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETLDYYTAMFESIDVACPRDDKKRISAEQH 460
************************************************************************************************ PP
GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+++r+ivn++aceg er+erhe l+kWr rl++aGFk+ ++s+++++ + ll+ ++++ yr+e+++g+l+lgW++r + + SaWr
C.cajan_04496 461 CVARDIVNMIACEGVERVERHELLGKWRLRLSMAGFKQCAFSSSVMAATQNLLKDFNQN-YRLEHKDGALYLGWMHRHMATSSAWR 545
*********************************************************66.*************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 545 aa
Download sequence Send
to blast |
MQTSQKHPSS AGVHFYHQPV QGIYQMLQSN LCHDSSSQGT TSVSFETCKE QYFTLESCPA 60
PTAFMDCDDS PSYASVSSKR TPFSPQGSQS CYSDHHQSSD NAYGSPISGL SSVDDGHGLK 120
HKLRELEISL LGLDESDIVD SCGCCMAKVG LQGASQLAKH DWDQIVENIP QLDLKGVLKV 180
CAQAVSDDDI PIARGWMDNV LGRMVSVSGD PIQRLGAYLL EGLRARLESS GNLIYKSLKC 240
EQPTSQELMS YMHILYQICP YWKFAYISAN AVIEEAMANE SRIHIIDFQI AQGTQWYLLI 300
QALAHRPGGP PSLRVTGVDD SQSIHARGGG LQIVGERLTD YARSCGVPFE FHSAAISGCD 360
VVRGNIEIRH GEALAVNFPY VLHHMPDESV STENHRDRLL RLVKSLSPKV VTLVEQESNT 420
NTSPFFHRFV ETLDYYTAMF ESIDVACPRD DKKRISAEQH CVARDIVNMI ACEGVERVER 480
HELLGKWRLR LSMAGFKQCA FSSSVMAATQ NLLKDFNQNY RLEHKDGALY LGWMHRHMAT 540
SSAWR
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
