PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_04140
Common NameKK1_004241
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 480aa    MW: 51801.5 Da    PI: 4.2388
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_04140genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM109.15.3e-34310526128
            NAM  26 kkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgekt 119
                    kk+++ ev++e+d+yk+ PwdLp +  +k+++  w+fF+++ kky +g+r nrat+ gyWk+tgkd+e+ + ++++vg+ ktLvf++g+apkg +t
  C.cajan_04140   3 KKMPM-EVMAELDLYKYAPWDLPdMsLLKTGDLVWFFFCPKGKKYLSGERLNRATEIGYWKTTGKDREIEH-NNRVVGMIKTLVFHTGKAPKGDRT 96 
                    66777.89**************96346677888*************************************9.999********************* PP

            NAM 120 dWvmheyrl 128
                    dWvmhe+r+
  C.cajan_04140  97 DWVMHEFRI 105
                    *******96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100540.6261128IPR003441NAC domain
SuperFamilySSF1019414.58E-422128IPR003441NAC domain
PfamPF023656.8E-1324105IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MGKKMPMEVM AELDLYKYAP WDLPDMSLLK TGDLVWFFFC PKGKKYLSGE RLNRATEIGY  60
WKTTGKDREI EHNNRVVGMI KTLVFHTGKA PKGDRTDWVM HEFRIVDKEL ADKGVSLDSC  120
VICKVFQKEG LGPRNGAQYG KPFNEKDWDT EKEIDPVQSA AVSAPVFIQP NASHISAQNN  180
DVGSVSELMA CSSSSAHPSA PNNEVGSVSE LMTSCSAHPS APNNEVGTVS ELMTSCSAHP  240
STPNNEVGSV SEMMTSCSAH PSTPNIEVGS VSEMMTSCSA HPSTPNNEVG SVSEMMTSCS  300
AHPSTPNIEV GSVSEMMTSC SAHPSTPNIE VGSVSDEVGY VSELMPSCSE HPLDPNNQVD  360
DDVISLLDWF TEGDISAMNE NNGIKKVDDP DQANDAECAP CSDPNEIFEN LGDLDSFFGL  420
GEGSLSSGQK NKYTTTSEVL SVGGDIFSSC DPVGYLELFD LEELQLLQNK HGSCSQDKEG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-34212941166NO APICAL MERISTEM PROTEIN
1ut4_B4e-34212941166NO APICAL MERISTEM PROTEIN
1ut7_A4e-34212941166NO APICAL MERISTEM PROTEIN
1ut7_B4e-34212941166NO APICAL MERISTEM PROTEIN
3swm_A6e-34212944169NAC domain-containing protein 19
3swm_B6e-34212944169NAC domain-containing protein 19
3swm_C6e-34212944169NAC domain-containing protein 19
3swm_D6e-34212944169NAC domain-containing protein 19
3swp_A6e-34212944169NAC domain-containing protein 19
3swp_B6e-34212944169NAC domain-containing protein 19
3swp_C6e-34212944169NAC domain-containing protein 19
3swp_D6e-34212944169NAC domain-containing protein 19
3ulx_A6e-34212939169Stress-induced transcription factor NAC1
4dul_A4e-34212941166NAC domain-containing protein 19
4dul_B4e-34212941166NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_04140
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020226562.10.0uncharacterized protein LOC109808119 isoform X1
TrEMBLA0A151ST240.0A0A151ST24_CAJCA; NAC domain-containing protein 78
STRINGGLYMA06G15840.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33023465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64060.18e-66NAC domain containing protein 103