PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_02255

Common Name

KK1_002310

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

WRKY

Protein Properties

Length: 286aa MW: 31990.9 Da PI: 5.5966

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_02255	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.8	5.3e-29	48	109	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK++ g++fpr+YYrCt++ gC ++k+v++s+edp ++eitY+g+H+++ C.cajan_02255 48 LDDGYSWRKYGQKDILGAKFPRGYYRCTYRnvqGCLATKQVQKSDEDPMICEITYKGRHTCT 109 59*************************98989************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	9.8E-27	46	110	IPR003657	WRKY domain
SuperFamily	SSF118290	6.93E-25	46	110	IPR003657	WRKY domain
SMART	SM00774	6.6E-40	48	110	IPR003657	WRKY domain
PROSITE profile	PS50811	22.205	48	106	IPR003657	WRKY domain
Pfam	PF03106	4.2E-26	49	108	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence Send to blast
MDSACSFANG SPRSEVMEPE VKHKDVFKKR KTTPKWTEQV KVCLGTSLDD GYSWRKYGQK 60 DILGAKFPRG YYRCTYRNVQ GCLATKQVQK SDEDPMICEI TYKGRHTCTQ ASHLNKAVVA 120 PTSKTNMGLG ENKHHNHQKN QPQEEKIEPQ ETIFSFGSSG LEVKTEDLDH KKDIFPSFCF 180 SSPSIGSEKE DNNMFSYAMI ENNNLMESFL IAPTTSEEPN IFCLSPCHWG SSTGLGQSMH 240 ASESDITDIV SAPTSVTNSP IMDLDFILAK IDFDTDFPIN APELCS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5w3x_B	1e-19	41	106	7	74	Disease resistance protein RRS1
5w3x_D	1e-19	41	106	7	74	Disease resistance protein RRS1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_02255

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KT031239	1e-136	KT031239.1 Glycine max clone HN_CCL_173 WRKY transcription factor (Glyma16g02960.1) mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020224984.1	0.0	probable WRKY transcription factor 46
TrEMBL	A0A151SMM0	0.0	A0A151SMM0_CAJCA; Putative WRKY transcription factor 46
STRING	XP_007135232.1	1e-143	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF493	34	157

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24110.1	4e-39	WRKY DNA-binding protein 30