PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_02052 | ||||||||
Common Name | KK1_002103 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | NAC | ||||||||
Protein Properties | Length: 210aa MW: 24068.1 Da PI: 7.3429 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 83.4 | 4.4e-26 | 14 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lp G+rF+Ptde l +yL+kk+ +++l+ + ++e+d++++ePw+L+ + + + ++ +f+ ++d+ ++ ++ + +g W+ + +++ + C.cajan_02052 14 LPIGYRFDPTDEVLTGYYLRKKILSQPLPH-NLVPECDVFQTEPWRLQgGERYLNWQKFFFYDPKDRVFEN--PQKIGAGNGEWRGVERGQQIELS 106 699************************999.89**************943333344455666667666554..33345689**************9 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e++ ++t vf++g+ + ++t+W+m+e++l C.cajan_02052 107 GKEVIAKRNTYVFWEGNGDNFTRTNWLMNEFHL 139 *******************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.7E-31 | 11 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 32.578 | 14 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.9E-15 | 15 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence Send to blast |
MELPNESEAR TYRLPIGYRF DPTDEVLTGY YLRKKILSQP LPHNLVPECD VFQTEPWRLQ 60 GGERYLNWQK FFFYDPKDRV FENPQKIGAG NGEWRGVERG QQIELSGKEV IAKRNTYVFW 120 EGNGDNFTRT NWLMNEFHLI LKSNPTMRSG MGIYRIFEVE GRRRKKARVS REGASTNGNS 180 GEVIDAVPTV IDLTETCGSV GDTPPPGSPC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-16 | 14 | 150 | 17 | 150 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-16 | 14 | 150 | 17 | 150 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-16 | 14 | 150 | 17 | 150 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-16 | 14 | 150 | 17 | 150 | NO APICAL MERISTEM PROTEIN |
4dul_A | 1e-16 | 14 | 150 | 17 | 150 | NAC domain-containing protein 19 |
4dul_B | 1e-16 | 14 | 150 | 17 | 150 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_02052 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020228032.1 | 1e-156 | NAC domain-containing protein 41 isoform X2 | ||||
TrEMBL | A0A151SM40 | 1e-154 | A0A151SM40_CAJCA; NAC domain-containing protein 7 | ||||
STRING | XP_007161703.1 | 2e-74 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13413 | 11 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33480.2 | 9e-23 | NAC domain containing protein 41 |