PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv_015870_rhiy.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family FAR1
Protein Properties Length: 135aa    MW: 15281.5 Da    PI: 8.9358
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv_015870_rhiy.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR133.91e-1055110157
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtrae 57 
                        kfY++YA ++GF++rks+++k+ ++g +  +   C+k g++e++k+k+e++ ++++ 
  Bv_015870_rhiy.t1  55 KFYDAYALHCGFNTRKSTTNKN-KSGVVAIKYCLCNKAGFKEKRKTKNEDKPKEQED 110
                        6*****************9999.67778888889**********9996665555544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.0E-855115IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
ESALVLSSFS TSTWVTPRAR PFVTPGGTRE WMPLCSNELT PVLGMKFDSL EEGIKFYDAY  60
ALHCGFNTRK STTNKNKSGV VAIKYCLCNK AGFKEKRKTK NEDKPKEQED GKATTRKSFL  120
VAMDLFHDMQ PEELF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010668319.13e-77PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A0J8B4E51e-96A0A0J8B4E5_BETVU; Uncharacterized protein (Fragment)
STRINGXP_010668319.11e-76(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.16e-08FAR1-related sequence 12