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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Bv9_223060_fkap.t1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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| Family |
WRKY |
| Protein Properties |
Length: 353aa MW: 38983.1 Da PI: 7.382 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bv9_223060_fkap.t1 | genome | TBVR | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95 | 5.5e-30 | 173 | 231 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK+ +++++pr+Y++C++a gCpvkkkv+rs ed+++++ tYeg+Hnh+
Bv9_223060_fkap.t1 173 KDGYQWRKYGQKVTRDNPCPRAYFKCSFApGCPVKKKVQRSLEDQSMLVATYEGDHNHP 231
8***************************99****************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0002237 | Biological Process | response to molecule of bacterial origin |
| GO:0009611 | Biological Process | response to wounding |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0010200 | Biological Process | response to chitin |
| GO:0042742 | Biological Process | defense response to bacterium |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0050691 | Biological Process | regulation of defense response to virus by host |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MDYSTWLSSP SMDNLSNANT LRLFDDAPVR DSNHLNKLDS ASTTSISNNT DDASKLWIKD 60
ETGALLEELN RVNAENKRLT EMLTVVCENY NDLKRQMVDY MTKSSSNEVN NVNKKRKTDN 120
ATLLVANNNN VETTSSSDEE DSYEKQPKEE TIKAKITRVA VRTEASDSTL ILKDGYQWRK 180
YGQKVTRDNP CPRAYFKCSF APGCPVKKKV QRSLEDQSML VATYEGDHNH PAPTQQEAAP 240
SALNRSFPLA SPASNASVVP NNITIERTKP KSNANNVNET TATATTTTTT TTNNNNKTTL 300
NNTTINPLSK FGSPEFQKLL AEQMASSLTK DPNFTAALAA AITGRFVKQS SSD
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250|UniProtKB:Q9SUP6}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB081952 | 4e-98 | AB081952.1 Spinacia oleracea Spwrky-1 mRNA for WRKY transcription factor 1, complete cds. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Zhang Y, et al.
Regulation of oncogene expression in T-DNA-transformed host plant cells.
PLoS Pathog., 2015. 11(1): p. e1004620
[PMID:25615824] - Geilen K,Böhmer M
Dynamic subnuclear relocalisation of WRKY40 in response to Abscisic acid in Arabidopsis thaliana.
Sci Rep, 2015. 5: p. 13369
[PMID:26293691] - Geilen K,Böhmer M
Dynamic subnuclear relocalization of WRKY40, a potential new mechanism of ABA-dependent transcription factor regulation.
Plant Signal Behav, 2015. 10(11): p. e1106659
[PMID:26479147] - Van Aken O, et al.
Mitochondrial and Chloroplast Stress Responses Are Modulated in Distinct Touch and Chemical Inhibition Phases.
Plant Physiol., 2016. 171(3): p. 2150-65
[PMID:27208304] - Carrió-Seguí À,Romero P,Sanz A,Peñarrubia L
Interaction Between ABA Signaling and Copper Homeostasis in Arabidopsis thaliana.
Plant Cell Physiol., 2016. 57(7): p. 1568-1582
[PMID:27328696] - Lu K, et al.
Overexpression of an Arabidopsis cysteine-rich receptor-like protein kinase, CRK5, enhances abscisic acid sensitivity and confers drought tolerance.
J. Exp. Bot., 2016. 67(17): p. 5009-27
[PMID:27406784] - Birkenbihl RP,Kracher B,Roccaro M,Somssich IE
Induced Genome-Wide Binding of Three Arabidopsis WRKY Transcription Factors during Early MAMP-Triggered Immunity.
Plant Cell, 2017. 29(1): p. 20-38
[PMID:28011690] - Lee MH,Jeon HS,Kim HG,Park OK
An Arabidopsis NAC transcription factor NAC4 promotes pathogen-induced cell death under negative regulation by microRNA164.
New Phytol., 2017. 214(1): p. 343-360
[PMID:28032643] - Zhang S, et al.
The Arabidopsis Mitochondrial Protease FtSH4 Is Involved in Leaf Senescence via Regulation of WRKY-Dependent Salicylic Acid Accumulation and Signaling.
Plant Physiol., 2017. 173(4): p. 2294-2307
[PMID:28250067] - Cheng P, et al.
The ERA-Related GTPase AtERG2 Associated with Mitochondria 18S RNA Is Essential for Early Embryo Development in Arabidopsis.
Front Plant Sci, 2018. 9: p. 182
[PMID:29497438]
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