 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Bv9_208100_jgpz.t1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
|
| Family |
NF-YC |
| Protein Properties |
Length: 254aa MW: 28697.3 Da PI: 10.4652 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bv9_208100_jgpz.t1 | genome | TBVR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 32.3 | 2.2e-10 | 146 | 234 | 12 | 99 |
NF-YC 12 katdfknhelPlarikkilkadedv.kmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99
k+++ + ++P ri +i+k++ ++s ea l+ ka e fi ++ ++ a e ++r + +a++v + + fdfl d vp++
Bv9_208100_jgpz.t1 146 KNEESSECAFPTNRILRIVKSEGSSdYKLSGEAVCLINKATEKFIELFSKDAYDSAVEDHKRFVAYKHLASVVCKKKRFDFLSDFVPEK 234
455666789************97652589****************999999***********************************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 254 aa
Download sequence Send
to blast |
MSTGQRFEKT FSRKNKEANK KNNEGKKSEQ QQQHVPESSS SQQLNGKLDN PSNKINNSTK 60
STVAKQPTNK NKKTSPTTTT KKPNNNNNTV KKKKNVSDSP KPEQKKEKIR EKNEEKDETQ 120
KQKRKTENGG GEIEKKPKTM KTTSSKNEES SECAFPTNRI LRIVKSEGSS DYKLSGEAVC 180
LINKATEKFI ELFSKDAYDS AVEDHKRFVA YKHLASVVCK KKRFDFLSDF VPEKVMAEKA 240
LAERKPAETL PPPG
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 122 | 137 | KRKTENGGGEIEKKPK |
