 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Bv8_185490_otdo.t1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
|
| Family |
TALE |
| Protein Properties |
Length: 388aa MW: 43408.4 Da PI: 7.2144 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bv8_185490_otdo.t1 | genome | TBVR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 28.9 | 2e-09 | 310 | 344 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55
k +yps++++ LA+++gL+++q+ +WF N+R ++
Bv8_185490_otdo.t1 310 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 344
569*****************************885 PP
|
| 2 | ELK | 39.9 | 9e-14 | 264 | 285 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK qLlrKYsgyLgsL+qEF+
Bv8_185490_otdo.t1 264 ELKGQLLRKYSGYLGSLRQEFL 285
9********************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009934 | Biological Process | regulation of meristem structural organization |
| GO:0048440 | Biological Process | carpel development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 388 aa
Download sequence Send
to blast |
MESNGNGHGH GNNNTNASCM MMENGLYSMI MIPPLSHQHH QHQHHQHQHQ SHNSHHDNNS 60
HNNNNNKVCC CSSSACSSSV AAAAAAAAAS GCYDLHHHHH QLMGMENQTQ NVNNSSSSTG 120
NIKAKIMSHP HYPRLLSAYV SCQKVGAPPE VVARLEEAET MAMSHGGGGR SGGGYIGEDP 180
ALDQFMEAYC EMLTKYEQEL TKPFKEAMLF LSRIECQFKA LTLSSPSDNS LSSACGKVPD 240
RNGSPEEDID VNNNYIDPSA EDRELKGQLL RKYSGYLGSL RQEFLKKRKK GKLPKEARQQ 300
LLDWWSRHYK WPYPSESQKL ALAESTGLDQ KQINNWFINQ RKRHWKPSED MQFVVMDAAA 360
HSHAHSHYGY MDNVLGNPFP MDVSPTLM
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 167 | 173 | GGRSGGG |
| 2 | 279 | 288 | LRQEFLKKRK |
| 3 | 285 | 289 | KKRKK |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Possible transcription activator involved in early embryonic development. Probably binds to the DNA sequence 5'-TGAC-3'. |
